Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1089 ATGAAGAGCGATTCCCATGACTCAGTCTCCACTCATTCTCCCAAAATCAGAACTCGTCAAGTAAGTTCCCGGTTCATGTCTCCGAACCCAACCGGTTCACCAGAACGCGGTTCAGCTTCTGCCACTAATTCCCCGTTTCGCCGGTTCCCCTCCCGTGGCCACCGTTGGCCTTCGACGGCGAAGAGAAACTCCACCACTCTCGCCGATCACATCGGCGACGAAAGACTCAGAGAAAGGGAACATCACAACCACCACCATAATCAGAATCAGAAAGCCACTAACAGAACAAACTCTGTTTTTTCTTCTCTCACAAAACAGAGAAGCTGCAGGGAGTTAAGCAACAACAACAATAACAGCAATGGCTTCGAAGAAAACGACCAACCCATTATTGGTAGGTCGATGAGGTACAGTTTCCCTGGAAAATCATCTTCTTTGGGGAAGAAACAGAGTTATCATATGGTTCCTGGAAGACTCTCTCTGGATGAAAATGCCCTTCAGAGGAACTCCGATTATTCTAGGAACTCAATTGATTCAGAATCAGATAATACGAGCTTCAATTATCTGCCACGAACTTGGAGTTATAGAAAAGTGGGTAAAGATGTTCAATCTAAGTACATGGCAACAAGTTCTCTAAGAGGAAGAGCTTCTGATTCGGATATCTCAAACTCGAAGCCTTTGTCTTCTGATGAATCGTGGGTGATGAAGAAGTTGATTTCTGAGAAAGCGATGAAGAAGGCTAATTCGCTTATTGGGTACATGAGTTCTAAGTCTCAGTGGGCATTGTCTCCTGGGAGGTCAGGGTCACCCCCTATGTCTTTGGAAAGCAAGGATAAGCCTTTGTCTTTTTCGAGTTTGAGGCCTCAAAACAAGAGTGTAGAGAAGATTCTGAGCATGGGTTTTGATCTCTTTAGGAGTAAAAAGTCTTCAACGAGTGTTGGGTTAGCTAACTCTGAGGCTGTTCATCAATTGCGCCTGCTTGATAACCGGTTGATCCAATGGCGGTTTGCCAATGCTAGAGCTCATGCTGTGAATGATAACATGTCTCTTCAGGCTGAGAGCAATTTGATATGTGCTTTGGATGGTATTGCCAAGTTGCAACGTTCAGTGGTCCAAAAAAAGATAGAGCTTGAGAGAGAAAAGCTTGAGATGAAGTTAAATTTTGTACTGCATTCTCAAATGAAGCTATTGGAAACATGGGCAAGTATGGAAAGGCAACATCTAGCTGCAATTTCCCTAATGAAACAGTGTTTGCATTCTGTTATATGCAAAGTTCCTCTTTTGGAAGGTGCAAAGGTGGATATACAATGGATGTCCATTGCTCAGAGGCATGCATCTGATCTCACAGCTTCCATCAAGTCAGTGTTATCTTGTTTCTCACCCTTGGCTGACAAGAATGCTGAGTTGCTATCAGAATTAGCAAAAATTGTTGCACAAGAAAAGTTGCTCTTACAGGAATTCAATGATCTTTTCCAGACCATGTGTGTCCTTGAGCTTAAAGAAAGGAGCCTGAAGTGCAGTTTCATTCAGCTCAAGTGCTGA 1539 0.436 MKSDSHDSVSTHSPKIRTRQVSSRFMSPNPTGSPERGSASATNSPFRRFPSRGHRWPSTAKRNSTTLADHIGDERLREREHHNHHHNQNQKATNRTNSVFSSLTKQRSCRELSNNNNNSNGFEENDQPIIGRSMRYSFPGKSSSLGKKQSYHMVPGRLSLDENALQRNSDYSRNSIDSESDNTSFNYLPRTWSYRKVGKDVQSKYMATSSLRGRASDSDISNSKPLSSDESWVMKKLISEKAMKKANSLIGYMSSKSQWALSPGRSGSPPMSLESKDKPLSFSSLRPQNKSVEKILSMGFDLFRSKKSSTSVGLANSEAVHQLRLLDNRLIQWRFANARAHAVNDNMSLQAESNLICALDGIAKLQRSVVQKKIELEREKLEMKLNFVLHSQMKLLETWASMERQHLAAISLMKQCLHSVICKVPLLEGAKVDIQWMSIAQRHASDLTASIKSVLSCFSPLADKNAELLSELAKIVAQEKLLLQEFNDLFQTMCVLELKERSLKCSFIQLKC* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1089 512 MobiDBLite consensus disorder prediction 1 68 - -
Apr3g1089 512 MobiDBLite consensus disorder prediction 14 47 - -
Apr3g1089 512 Pfam QWRF family 184 484 IPR007573 -
Apr3g1089 512 MobiDBLite consensus disorder prediction 258 284 - -
Apr3g1089 512 PANTHER QWRF MOTIF PROTEIN (DUF566)-RELATED 16 511 - -
Apr3g1089 512 PANTHER AUGMIN FAMILY MEMBER 16 511 - -
Apr3g1089 512 Coils Coil 362 382 - -
Apr3g1089 512 MobiDBLite consensus disorder prediction 80 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1089 Apr-Chr3 25517642 25520267 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1089 - - aprc:113859691 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1089 3 25517642 25520267 Apr3g1089 3 25517642 25520267 ECH
Apr2g1950 2 24925109 24927729 Apr3g1089 3 25517642 25520267 PCT