Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1950 ATGAAAACGCCCAACACCTCTCCGGTTTCTAGTTCGTCTCCAAAATCTCGCCTACACAGAAACCGGGAACTGACCTCACGGTTTTCACCTTCCCCTCCAAGCGCAACCACACCCTCTCTGGAATCCATAGAATGCAATTCCCCAATTCGACGCAAATCGTCCAGTCCCGCCGATGGCCGGCGACACAAGATCACCGAGGACCCGGGTTTCACGCGCCACCAACTATGGCCTTCTTCTTCTTCTTCTTCTTCAACGACGGCGAAGAGAGATTCTGGCACTCTCGCCGATCACATCACCGAAGACAGAATCATAGAGCAACTCAACGTGAACGAGAAAGAGAGACATAACAAATCAAGCTCCATTTTTTCGCAGATGGGTAGCAGAGGCTTCGAGAACTGCGCAACTTCTTCGACTGCAAGCAATGGCTTCAAGGAAAATGATCGACCCATTATTGGTGGGTCCACGAGGTTCTCGGGAAGATTCATAGCACCCGGAGAATCATCACCTTCTTCAAAGAAAAACGGTTCTAACAGCGCTGTCTTCACCGGTGAGAATGCTAAATCACTGTCTTCACGGAGAAACTCTTGTTCTTTCTCAAATTCTCTTGATTTAGAATCTGATTATGGTGACATGGGAACAACGTCGAGAAAAGCGGGTAAGGAGGTTCCGTCGAGGTACACGAGTGACGTAACGTCGAGAAGGGCGGCTCGAAGAGGAACTTCAGATTCTAACATTGCGAACTTGGACGGTGATTCCTCTGTTTTGAAGAGGTTCAACTTGAAAACGGCGATAAAGAGGGCTAATTCGCTTACTGGGTACAAGAGTTCCAAGTCTCAGTGGGCTTTGTCACCTGCGAGGTCAGAGTCACCGGCTATGTCGGTTGAAAGCATGGATAAAACGATGTTGTTTTCGAGCTTGAAGCACCCCATTGGTCCTACAAAGGCTAAAGGGGTGGAAAAGTTTCTCAGCTTGGGTTTTGATCTTTTCAAGAGTAAGAAATTATCTGGGTTTGGTTCTTCTCCGGTTGGTTTTGGAATAAACTCAGAGGTTGTTCATCAGCTTAGAATGCTTCATAATCGTTTCATTCAATGGCGGTTTGCAAATGCCAGAGCTCAAGCTGTGAATGAAAACATCTCTCATCAGGCTGAGAGCAATTTGATGCGTGCTTGGGATGGGCTCACAAAGTTGCAGCATTCTGTTCTGAAAAAGAAGATACAGTTTGCAAGAGAAAAACTTGATATGAAGATCACTTTTGTACTGTATTCTCAAATGAAGCTATTGGAAGCTTGGGGAGGCATGGAAAGGCAGCACGTGTCAGCAATTACTGCCACCAAAGAGTGTTTGCATTCCGTTGTGTGCAGAGTTCCTCTTTTGGAAGGTGCTAGGGTGAACATGCAATCAACATCCATTGCTATAAGGCATGCATCTGACCTCACAGCCTCCATCAAGTCAATGTTAACTACTTTTTCATCTTCAGTTGATAAGACTGCTACAATGCTATCAGAATTAGCAAAAATTGTTGCACAAGAGAAGCAGATTTTAGAGGAGTTCTATGATCTTTTCCAGACCATATCAATCTTCGAGCTACAAGAAAGAAGTATGAAGTGCAATGTCTTTCAACTTGAAGATTGGCAAAGGAAATATCTACTAGCGGGGATCACTTCATAG 1668 0.4526 MKTPNTSPVSSSSPKSRLHRNRELTSRFSPSPPSATTPSLESIECNSPIRRKSSSPADGRRHKITEDPGFTRHQLWPSSSSSSSTTAKRDSGTLADHITEDRIIEQLNVNEKERHNKSSSIFSQMGSRGFENCATSSTASNGFKENDRPIIGGSTRFSGRFIAPGESSPSSKKNGSNSAVFTGENAKSLSSRRNSCSFSNSLDLESDYGDMGTTSRKAGKEVPSRYTSDVTSRRAARRGTSDSNIANLDGDSSVLKRFNLKTAIKRANSLTGYKSSKSQWALSPARSESPAMSVESMDKTMLFSSLKHPIGPTKAKGVEKFLSLGFDLFKSKKLSGFGSSPVGFGINSEVVHQLRMLHNRFIQWRFANARAQAVNENISHQAESNLMRAWDGLTKLQHSVLKKKIQFAREKLDMKITFVLYSQMKLLEAWGGMERQHVSAITATKECLHSVVCRVPLLEGARVNMQSTSIAIRHASDLTASIKSMLTTFSSSVDKTATMLSELAKIVAQEKQILEEFYDLFQTISIFELQERSMKCNVFQLEDWQRKYLLAGITS* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1950 555 MobiDBLite consensus disorder prediction 1 99 - -
Apr2g1950 555 MobiDBLite consensus disorder prediction 54 69 - -
Apr2g1950 555 PANTHER QWRF MOTIF PROTEIN (DUF566)-RELATED 14 548 - -
Apr2g1950 555 MobiDBLite consensus disorder prediction 1 15 - -
Apr2g1950 555 PANTHER AUGMIN FAMILY MEMBER 14 548 - -
Apr2g1950 555 MobiDBLite consensus disorder prediction 164 179 - -
Apr2g1950 555 Pfam QWRF family 212 515 IPR007573 -
Apr2g1950 555 MobiDBLite consensus disorder prediction 72 92 - -
Apr2g1950 555 MobiDBLite consensus disorder prediction 207 242 - -
Apr2g1950 555 MobiDBLite consensus disorder prediction 25 53 - -
Apr2g1950 555 MobiDBLite consensus disorder prediction 137 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1950 Apr-Chr2 24925109 24927729 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1950 - - gmx:102668093 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1950 2 24925109 24927729 Apr2g1950 2 24925109 24927729 ECH
Apr2g1950 2 24925109 24927729 Apr3g1089 3 25517642 25520267 PCT