Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1083 ATGAGTCGCTACGACACAAATCCTTTCGACGATGACGTCGAGGTCAATCCCTTTGCGGATGGAAATAAAGGAAAAGGGTCAGGGCAATCGAGTTATGGTGGAGGTGCATTTTATACTACTAACACTGGAAGTGTTCCCTCTGCAAACTCAAGGCTCTCACCCCTTCCTCCAGAGCCTTATGATCGTGGGGCTACCATTGACATCCCTCTAGACAACTCAAAGGACATCAAAGCAAAGGAGAAGGAACTTCAAGCTAAAGAGGCTGAATTGAAAAGAAGGGAACAGGAACTAAAACGAAGGGAAGATGCTATAGCACGAGCTGGAGTAGTTATAGAGGAGAAAAATTGGCCACCTTTTTTCCCCCTCATTCACCATGACATTGCAACTGAAATACCTATCCATCTTCAAAGGATCCAGTACATTGCATTTTCAACATGGTTGGGTTTGATTCTGTGCCTTTTGTGGAACATTGTGGCAGTTACTACTGCTTGGATCAAAGGAGAAGGTCCTACCATCTGGTTTCTTGCTATTATCTATTTTATTTCTGGTGCTCCAGGATCCTATGTGTTGTGGTATCGCCCTCTTTATCGTGCTATGAGGACTGACAGTGCTCTCAAATTTGGCTTGTTTTTCTTGCTCTACATGTTGCACATTGCCTTCTGCGTTTTTGCTGCAGTTGCTCCACCAATTATCTTCAAAGGAAAATCTCTCACAGGAATTTTGCCCGCGATTGATGTGATGGGCGACAATGCATTGGTTGGGATATTCTATTTTATTGGGTTTGGACTTTTCTGTGTTGAGTCATTGCTGAGCATCTGGGTTATACAGCAAGTATATATGTACTTCCGCGGCAGTGGCAAGGCTGCAGTGTTAAAGCGTGAGGCTACGAGAGGGACAATGATGGCAGCTCTGTGA 915 0.4448 MSRYDTNPFDDDVEVNPFADGNKGKGSGQSSYGGGAFYTTNTGSVPSANSRLSPLPPEPYDRGATIDIPLDNSKDIKAKEKELQAKEAELKRREQELKRREDAIARAGVVIEEKNWPPFFPLIHHDIATEIPIHLQRIQYIAFSTWLGLILCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGAPGSYVLWYRPLYRAMRTDSALKFGLFFLLYMLHIAFCVFAAVAPPIIFKGKSLTGILPAIDVMGDNALVGIFYFIGFGLFCVESLLSIWVIQQVYMYFRGSGKAAVLKREATRGTMMAAL* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1083 304 Coils Coil 73 103 - -
Apr3g1083 304 MobiDBLite consensus disorder prediction 1 58 - -
Apr3g1083 304 MobiDBLite consensus disorder prediction 23 51 - -
Apr3g1083 304 Pfam SCAMP family 113 284 IPR007273 GO:0015031|GO:0016021
Apr3g1083 304 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 1 304 - -
Apr3g1083 304 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 304 IPR007273 GO:0015031|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1083 Apr-Chr3 25470102 25476797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1083 3 304 Miscellaneous Gene Families AT1G11180 66.990 1.59e-145 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1083 K19995 - gmx:100796729 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1083 3 25470102 25476797 Apr3g1083 3 25470102 25476797 ECH
Apr2g1944 2 24887826 24893149 Apr3g1083 3 25470102 25476797 PCT