Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0948 ATGGATGCAGCTCCTTTGCACATTGCAATGTATCCATGGTTTGCTATGGGGCACCTTACCCCGTTTCTACACCTTGCAAACAAGTTAGCCAAAAGGGGACACAAAATCTCCTTTTTCATACCAAAAAGAACACAAGCCAAGTTACAAAACCTTAACCTTCACCCATGTCTCATAACCTTTGTTCCTATCAATGTTCCTCATGTTGATGGTCTTCCTAATGATGCAGAGACAACTTCAGATGTTCACTCCTCTTTGTTCCCACTTATTGCCGCTGCCATGGATCACACAGAGAAAGATATTGAACTTCTCCTCCTTGAGCTTAAACCACATATTGTTTTGTTTGATTTTGCCACATACTGGCTTCCAAACATTGCTCGTAGGATAGGGATCAAGTCTCTTCAGTACTATATTATTAGTCCTGCAACAGTAGGATACATGGCATCTCCAGCTAGAGAAAAAGATGATGATATGAAGAAACCACCTTCTGGTTTCCCTGATTCATGCATCAAGTTTCATGCTCATGAACTTCGATTCCTTGCTGCATCAAGGAAACTTGAGTTTGGTAATGGTGTTCTTTTGTATGATCGTATCTCAATTGGTGCAAATTTGTCAGATGCTATTGGATTCAAAGGTTGCAGAGAAATTGAAGGGCCTTATGTGGATTATCTTGAAACACAGTTTGGTAAGCCTGTTATGCTTTCTGGGCCTCTTGTGCCAGAACCATCAAACTCTACTTTGGAGGAAAAATGGGGTGAATGGCTTGGAGGATTCAAGGCTGGCTCAGTGGTTTATTGTGCATTTGGAAGTGAAAACACATTACAGAAAAATCAATTGCAAGAGTTGTTACTGGGTCTTGAGCTATCAGGAGTTCCATTTCTTGCAGCACTTAAGCCCCCTATTGAGGATGCTCTTCCAAAAGGGTTCCAAGAAAGGGTTGAAGGAAAAGGGGTTGTATATGGAGGGTGGGTGCAGCAACAATTGATTTTGGCACACCCTTCTGTTGGGTGCTTTATAACACACTGTGGTGCTGCTTCTCTAACTGAGGCACTTGTGAATGAGTGCCAATTGGTGTTGCTGCCACGCCTTGGTTCAGATTTTATCATTAATGCAAGAAACATGAGTGGAAAACTGAGGGTAGGTGTTGAGGTGGCGAAAGGTGAAGATGATGGGTGGTTCACAAAGGAAAGTGTGTGTAAAGCTGTGAAGATTGTGATGGATGATGAGAATGAGCTTGGCAGAGAAGTCAGAGCAAATCATAGCAAAGTGAGGAACCTCTTACTAAGCAAGAATTTTGAGCCATCTTGTGTTGACGCTTTCTGTCATAGTCTTCAGGATTTACTCTATAAGTAA 1350 0.4207 MDAAPLHIAMYPWFAMGHLTPFLHLANKLAKRGHKISFFIPKRTQAKLQNLNLHPCLITFVPINVPHVDGLPNDAETTSDVHSSLFPLIAAAMDHTEKDIELLLLELKPHIVLFDFATYWLPNIARRIGIKSLQYYIISPATVGYMASPAREKDDDMKKPPSGFPDSCIKFHAHELRFLAASRKLEFGNGVLLYDRISIGANLSDAIGFKGCREIEGPYVDYLETQFGKPVMLSGPLVPEPSNSTLEEKWGEWLGGFKAGSVVYCAFGSENTLQKNQLQELLLGLELSGVPFLAALKPPIEDALPKGFQERVEGKGVVYGGWVQQQLILAHPSVGCFITHCGAASLTEALVNECQLVLLPRLGSDFIINARNMSGKLRVGVEVAKGEDDGWFTKESVCKAVKIVMDDENELGREVRANHSKVRNLLLSKNFEPSCVDAFCHSLQDLLYK* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0948 449 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 431 - -
Apr3g0948 449 PANTHER GLYCOSYLTRANSFERASE 2 444 - -
Apr3g0948 449 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 317 408 IPR002213 GO:0008194
Apr3g0948 449 PANTHER UDP-GLYCOSYLTRANSFERASE SUPERFAMILY PROTEIN 2 444 - -
Apr3g0948 449 CDD GT1_Gtf-like 6 423 IPR002213 GO:0008194
Apr3g0948 449 Gene3D Glycogen Phosphorylase B; 2 249 - -
Apr3g0948 449 Gene3D Glycogen Phosphorylase B; 250 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0948 Apr-Chr3 24398741 24400090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0948 3 447 Glycosyltransferase AT5G54010 48.238 2.62e-151 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0948 K22794 - gmx:100820538 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1840 2 23996067 23997647 Apr3g0948 3 24398741 24400090 PCT