Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1840 ATGGATGCACCACCTCCTTTGCACATAGCCATGTTTCCATGGTTTGCTATGGGACACCTAACCCCATTTCTTCATCTATCTAACAAATTTGCAAAGAGAGGACACAAAATCTCTTTTTTCATCCCCAAAAGAACACAATCCAAGTTAGAGCAATTCAATCTCTACCCACATCTCATTACCTTTTACCCTATCAATGTTCCGCATGTTGATGGCCTTCCGCATGGTGCAGAAACCACTTCTGATGTGTCTTTTGCTCTAGGTCCACTCGTTATGACAGCTATGGATCGCACTGAGAAGGATATTGAAGCTCTCCTCATTCAGCTGAAGCCTCAAATTGTGTTCTTTGATTTGGCATATTGGCTACCAAACTTGACTCAACGTTTGGGAATCAAATCTTTTCAATACTTGATTGTTAACCCAGCAACAGTAGCTTACACTACAACCCCAACAAGGATGCGCCACAATGCTAACTTGACTGAGTTTGACCTTATGCAACCCCCTGTTGGGTATCCTGTTTCATCCATAAAGCTTCATTCCCATGAAGCAAAGTTCTTTGCTTCCAAAAGGACATGGGAATTTGGTGGTGGTGTTCTTTTTTATGATCGTCTCTATGGTGGTTTAAGCCTATCAAATGCAATTGGGTTCAAAGGGTGTAGAGAAATTGAGGGGCCTTATGTCGACTACCTTGAAGACCAGTTTGGGAAGCCTGTTTTGCTTTCAGGGCCTGTCATACCTGAGCCACCCAACGCTGTTTTAGAGGAAAAGTGGGCTTCATGGCTCGGAGGGTTCAAGGATGGTTCGGTTATTTACTGTGCACTTGGGAGTGAATGGAAATTACCACATGATCAATTCCAAGAATTGTTGTTGGGTCTTGAGCTAACAGGCTTGCCTTTTTTCGCTGTTATTAAAACTCCTATCGGATTTGAGACAATTGAAGCTGCTTTCCCACAAGGTTTCAATGAAAGGGTTGAAGGGAGAGGGATTGTGCTGAGTGGATGGATACAACAGCAACTGATTTTGGAACACCCATCTGTGGGTTGCTTCATAACGCATTGTGGGGCGGGTTCATTAACCGAGGCACTGGTAAATAAGTGTCAAATAGTGTTACTACCGCATCTAGATACTGATCATGTTGTTAATGCAAGGATGATGGGTACAAACTTGAAGGTTGGGATTGAAGTGGAGAAGGGTGAGGAAGATGGGTTATTCACAAAGGAAAGTGTACGCAAAGCTGTGAAAATTGTGATGGATGATGAGAATGGGCTTGGGAGAGAAGTCAGGGAAAATCATACTAGAGTGAGGAACTTGTTACTTAGTCCCAAGTTGGAGGCCGCATCTGTTGATAGTTTTTCTCAAAAGCTTCGAGATTTACTCGGCTGA 1380 0.4326 MDAPPPLHIAMFPWFAMGHLTPFLHLSNKFAKRGHKISFFIPKRTQSKLEQFNLYPHLITFYPINVPHVDGLPHGAETTSDVSFALGPLVMTAMDRTEKDIEALLIQLKPQIVFFDLAYWLPNLTQRLGIKSFQYLIVNPATVAYTTTPTRMRHNANLTEFDLMQPPVGYPVSSIKLHSHEAKFFASKRTWEFGGGVLFYDRLYGGLSLSNAIGFKGCREIEGPYVDYLEDQFGKPVLLSGPVIPEPPNAVLEEKWASWLGGFKDGSVIYCALGSEWKLPHDQFQELLLGLELTGLPFFAVIKTPIGFETIEAAFPQGFNERVEGRGIVLSGWIQQQLILEHPSVGCFITHCGAGSLTEALVNKCQIVLLPHLDTDHVVNARMMGTNLKVGIEVEKGEEDGLFTKESVRKAVKIVMDDENGLGREVRENHTRVRNLLLSPKLEAASVDSFSQKLRDLLG* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1840 459 Gene3D Glycogen Phosphorylase B; 258 437 - -
Apr2g1840 459 CDD GT1_Gtf-like 7 442 IPR002213 GO:0008194
Apr2g1840 459 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 329 419 IPR002213 GO:0008194
Apr2g1840 459 PANTHER ANTHOCYANIDIN 3-O-GLUCOSIDE 2''-O-GLUCOSYLTRANSFERASE-RELATED 5 456 - -
Apr2g1840 459 Gene3D Glycogen Phosphorylase B; 4 257 - -
Apr2g1840 459 PANTHER GLYCOSYLTRANSFERASE 5 456 - -
Apr2g1840 459 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1840 Apr-Chr2 23996067 23997647 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1840 7 458 Glycosyltransferase AT5G54010 46.358 9.97e-151 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1840 K22794 - gmx:100808470 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1840 2 23996067 23997647 Apr3g0948 3 24398741 24400090 PCT