Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0209 ATGGAACAACTCCTCCGAGCAGGAGAAGCCTCCAAGTCCAAGCATTCACCAACCCACAGCTCCCCTTCCTCCTCCTCTCCTTCCTCATCCTCTCCCTTCTTTCAGAGGTTGAAGCACCATGACCAAGAAGAAGACCACGGCCAGAATCAGAAGAAATCAGTTCTCACCAAAGTGAAGGAGAAGGCCAAGAAATTACGCCACAGCCTCAGCAAGAAGAAACACGAGGACGGGAACTCTCCTAGTCCCACATCGGGTGCAGGCTTAGAAGGTGATGGAGTAGAAGAAGATGTTGCCGGTTACCTCGGAGCTCCGATGTACGAATCAGAGAAAGCACCTTTAGGATACAAAGAAAATCCAAAGCAGAATCATCCAAGAGGAAATCCAGCAACCCCTGAGAAGCATTTTATATCAAGCAATGACAAACACGTAGTGGAACAAAATCAAGAAAAAACACTTAGTCGTTCACTGTCAAAGAAAACACCACAACATGCAGCAGCAGTATCAACAACAACAACTATTCCAACTACTATTACTAGTGTTTCTGGTGCAAATAAGGCCAAAAACATAGCCGAGAAACTCACACCAGTTTATGCTGAAGGGTCAGAAGCAGCCAACTCTGTAACCTCCAAAATACAAGGCATCACTGTATCCAAACCCAAAGAGCGTCTCCATCATCATTATCATCATTATAATCACACTGCACCATCAAAACTTTCACCTACAAGTACAACAATTAACAAGGCTTCTTTGTCCCTTCCTGCTCCAAGTACTCCTCCTGCAAAGGGACCAGCCCAAACTTCTCCAAGAACAATGAGAACTACATCAGCTCCAGCGATTCCAGCATCTTCTTTATCTCCTGCTGCACCGAGTGGGAAGACTCCAAGCCCCACTGCGCAAATATGGGATAAGGGTGTTTCAGTGAAAGAGTACTTGATGAACAAGTTGGAGCCAGGAGAAGATGAGAAAGCTCTATCTCAGGTGATATCTGAAGCAATGAGTCCTAAGAGAACTCCTGGTGATGCAGGTGTTATGGAGAAGGTGAGAGAAGCTGTTACTTCCTTGCTTCGAAATGAGGAACCAACAAAATATGAAGATGCAACTCCTTCTATTACCACGTCATCTCAAATCCTCCCAGCATCTCCCAATGCTACTAGTACTTCAACTCAAATCCCAATATCTACCAACGCTCGAGAAGTGGTTCAGGAAGAAAACCATGACAGAATTCTTCAGGCAAATTGA 1239 0.4504 MEQLLRAGEASKSKHSPTHSSPSSSSPSSSSPFFQRLKHHDQEEDHGQNQKKSVLTKVKEKAKKLRHSLSKKKHEDGNSPSPTSGAGLEGDGVEEDVAGYLGAPMYESEKAPLGYKENPKQNHPRGNPATPEKHFISSNDKHVVEQNQEKTLSRSLSKKTPQHAAAVSTTTTIPTTITSVSGANKAKNIAEKLTPVYAEGSEAANSVTSKIQGITVSKPKERLHHHYHHYNHTAPSKLSPTSTTINKASLSLPAPSTPPAKGPAQTSPRTMRTTSAPAIPASSLSPAAPSGKTPSPTAQIWDKGVSVKEYLMNKLEPGEDEKALSQVISEAMSPKRTPGDAGVMEKVREAVTSLLRNEEPTKYEDATPSITTSSQILPASPNATSTSTQIPISTNAREVVQEENHDRILQAN* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0209 412 Coils Coil 55 75 - -
Apr3g0209 412 MobiDBLite consensus disorder prediction 360 412 - -
Apr3g0209 412 MobiDBLite consensus disorder prediction 149 169 - -
Apr3g0209 412 MobiDBLite consensus disorder prediction 14 35 - -
Apr3g0209 412 PANTHER LOW-TEMPERATURE-INDUCED PROTEIN 18 412 - -
Apr3g0209 412 MobiDBLite consensus disorder prediction 1 169 - -
Apr3g0209 412 MobiDBLite consensus disorder prediction 234 253 - -
Apr3g0209 412 MobiDBLite consensus disorder prediction 364 398 - -
Apr3g0209 412 MobiDBLite consensus disorder prediction 263 299 - -
Apr3g0209 412 MobiDBLite consensus disorder prediction 231 299 - -
Apr3g0209 412 MobiDBLite consensus disorder prediction 36 56 - -
Apr3g0209 412 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 18 412 IPR037491 GO:0009737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0209 Apr-Chr3 3799120 3800966 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0209 - - aprc:113859169 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2318 2 28089623 28091235 Apr3g0209 3 3799120 3800966 PCT