Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2318 ATGCCTTTTTCAGAACGCACGTACAGACAAGTTAATACTTCAAGAAATTCTACCATCAATGGCATGGAGCAATACATTCGAGGAGGGGATTCCACAAGGATGTCACCAACCTATTACTCTCCCACCTCATCTTCCCCTTCTTCTCCACACTCTGACAAGTTGAAGAGCATAGACCCAGAAGAAGATCATGCTCTCTATCAGAAGAAATCATCAGTTCTCTCCAAAGTGAAGGAGAAGGCAAGGAGATTCCGCAACAGCCTCAACAAGAAGAAACTTGAGGATGAGAACTTCACACCGTCTTGGGGTGTTAGCTTAGAAGATGATGGGGAAGAAGAAGAAGATGCTGAATACCTTGGAGCTCCAATGTATGAATCGGAGCTGGCACCTGAGGGATACAAAGAAAATGCAAGGCAGCATCCAAGAGCAAATCCAGTAATCTCCGAGAAGCATGTTTTGCAAACCTGTATCAAATCTGGGGTGCAACAAGATCGAGAAAATTCACTTGGTCTTGTCAATTCCACCACCACAACTCAACCTCAAACTACAACTCCAACTCATGCTGGTCCAAACTGCACAATGAATGCAACCATAGCCCAGAAACTGACACCTATCATTGTTGGAGGGTCAGATTCATCTAATTCACTATCCTCCAAAACTCATGCTGTTTCCACAACTCCTCAAGGCAACACATTCTGCCAAACTTGTTCACCAGCTCCATCTCCTGTGCAATATTCATCATCCCCATATGCTTCATTGAGTGGGGGAAATACATCCTCAAATGGTGCTACGGTGACATATGAAGAAACAACTCCAAGTATATATACTAGTAATGTAGGTGTGATTGAAAAGGTGAAAGAAGCTGTGAATTCTTTGCTCTGGAATGAGGAGCCATCACAACAATATACAGTTAAAACTCCTACCACACTTTCTTCATCGCAAACTCAAGAAGTTGATCAGGAAGAGAACCGTGGGAGAATTCTTCAGGCAAATTAA 993 0.431 MPFSERTYRQVNTSRNSTINGMEQYIRGGDSTRMSPTYYSPTSSSPSSPHSDKLKSIDPEEDHALYQKKSSVLSKVKEKARRFRNSLNKKKLEDENFTPSWGVSLEDDGEEEEDAEYLGAPMYESELAPEGYKENARQHPRANPVISEKHVLQTCIKSGVQQDRENSLGLVNSTTTTQPQTTTPTHAGPNCTMNATIAQKLTPIIVGGSDSSNSLSSKTHAVSTTPQGNTFCQTCSPAPSPVQYSSSPYASLSGGNTSSNGATVTYEETTPSIYTSNVGVIEKVKEAVNSLLWNEEPSQQYTVKTPTTLSSSQTQEVDQEENRGRILQAN* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2318 330 Coils Coil 73 93 - -
Apr2g2318 330 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 17 247 IPR037491 GO:0009737
Apr2g2318 330 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 256 330 IPR037491 GO:0009737
Apr2g2318 330 PANTHER EUKARYOTIC RNA POLYMERASE II HEPTAPEPTIDE REPEAT 17 247 - -
Apr2g2318 330 PANTHER EUKARYOTIC RNA POLYMERASE II HEPTAPEPTIDE REPEAT 256 330 - -
Apr2g2318 330 MobiDBLite consensus disorder prediction 296 330 - -
Apr2g2318 330 MobiDBLite consensus disorder prediction 1 52 - -
Apr2g2318 330 MobiDBLite consensus disorder prediction 1 60 - -
Apr2g2318 330 MobiDBLite consensus disorder prediction 296 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2318 Apr-Chr2 28089623 28091235 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2318 - - lang:109342959 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2318 2 28089623 28091235 Apr3g0209 3 3799120 3800966 PCT