Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0200 ATGGAAGGCGGGCATAAGTTCCAGGAAGCATCAAAGGCAAAATATGATTGTCTTTTATTTGATCTTGACGACACCCTTTATCCTTTGTGTTCTGGAATGTCAGCCCAAACAGCAAAAAACATTCAAGAGTTTATGCTTCAAAAGCTTGGGATGGAGGCTGCTGAAGTTCCCGAATTATGCCATTCATTATATAAGACTTATGGGACAACAATGGCTGGTCTAAAGGCAATTGGCTATGACTTTGACTATGATGACTTTCACAGTTTTGTTCATGGGAGATTGCCATATAATATGTTGCTGAAACCAGACCCTGTTCTCAGGAGCATTCTGCAAAGCTTGCCGATTAGGAAAATTATTTTTACAAATGCAGACTCAAAGCATGCATTTAGAGCACTTCAAAGCCTTGGATTGGAGGACTGCTTTGAAAAAATTATAAGTTTTGATACTCTGAATTCTTCCAACAACATTGATCCTTCTTGTGATGAAGATGGCAATGTGGTGCTCCCAAGGACCCCAGTTGTCTGCAAACCCTTTGATGATGCTTTTGAAAACGTTTTCAAGTTGGCAAACATTGATCCTCAAAGAACACTGTTCTTTGATGACAGCTTCCGCAATTTAGTAACAGCCAAACGCTTGGGCCTCCACACAGTCGCTGTGGGTACATCTGTTCGTGCAACAGGAGTGGATCATGCATTGGAGTGTATCCATAATGTCAGGGAGGCGTTTCCAGAGCTTTGGGATTCCGACGAGAAACATGAAATTGTCCAGTACAAAGTTGCTATTGAAACATCAGTAAAAGCATAG 804 0.4129 MEGGHKFQEASKAKYDCLLFDLDDTLYPLCSGMSAQTAKNIQEFMLQKLGMEAAEVPELCHSLYKTYGTTMAGLKAIGYDFDYDDFHSFVHGRLPYNMLLKPDPVLRSILQSLPIRKIIFTNADSKHAFRALQSLGLEDCFEKIISFDTLNSSNNIDPSCDEDGNVVLPRTPVVCKPFDDAFENVFKLANIDPQRTLFFDDSFRNLVTAKRLGLHTVAVGTSVRATGVDHALECIHNVREAFPELWDSDEKHEIVQYKVAIETSVKA* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0200 267 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 267 - -
Apr3g0200 267 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 16 218 IPR010237 -
Apr3g0200 267 SFLD C1.5.3: 5'-Nucleotidase Like 9 248 IPR010237 -
Apr3g0200 267 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 9 248 - -
Apr3g0200 267 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 171 219 IPR006439 -
Apr3g0200 267 Gene3D - 80 246 IPR023214 -
Apr3g0200 267 SUPERFAMILY HAD-like 17 223 IPR036412 -
Apr3g0200 267 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0200 Apr-Chr3 3706467 3708454 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0200 K07025 - gmx:100807005 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2310 2 28039714 28042486 Apr3g0200 3 3706467 3708454 PCT