Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2310 ATGGAAAACGGGGATCAGTTCCAGGAAATGTCAAAGGCGAAATACGATTGTCTTTTATTTGATCTTGATGATACCCTTTATCCTTTGAGTTCTGGATTGGCAGAGCACGTGAAAAAAAATATTCAGGAGTACATGCTTCAAAAGCTTGGGATACAGGAGGCTAAAGTTCCTGAATTATGCTTTTCCTTATATAAGGCATACGGGACAACAATGGCTGGTCTTAAGGCTATTGGCTATGGCTTTGACTATGATGACTTTCATGGATTTGTTCATGGTAGATTGCCATATAATATACTGAAACCTGACCCTATTCTCAAGGGAATTTTACTAAGCCTGCCTGTTAGAAAAGTTGTTTTTACAAACTCAGATGAGGCCCATGCAAGTAGAGTGCTTCATAGGCTTGGACTGGAGGATTGTTTTGATCGAATAATAAGCTTTGAGACTCTCAATCCTTCAAATAACAATGAAGATGGCAGTGAATATAAGCCAAGTTCCACAGGAATATTTGATTTTTATGAGTACATTCGAAGGCCTGATTCTGATATCGAGCTTCCAAAGACACCGGTTGTATGCAAACCCTTTGAAGATGCCTTTGAAAAGGTTTTTGATATGGCAAATATTGACCCTCAAAGAGCATTATTCTTTGATGACAGTGTCCGCAATTTACGGACGGGAAAATCACTTGGTCTCCACACTGTCCTGGTGGGCACTTCGGTTCGAACTTCAGGAGTGGATCATGCCTTGGAGAGCATCCATAATATGAAGGAGGCATTTCCAGAACTATGGGAAGCTGATGAAAAGCCTGAAAATGTGAAGTGCTCTAGAAAGGTTTCAATTGAAACATCAGTAATAGCTTAA 858 0.3998 MENGDQFQEMSKAKYDCLLFDLDDTLYPLSSGLAEHVKKNIQEYMLQKLGIQEAKVPELCFSLYKAYGTTMAGLKAIGYGFDYDDFHGFVHGRLPYNILKPDPILKGILLSLPVRKVVFTNSDEAHASRVLHRLGLEDCFDRIISFETLNPSNNNEDGSEYKPSSTGIFDFYEYIRRPDSDIELPKTPVVCKPFEDAFEKVFDMANIDPQRALFFDDSVRNLRTGKSLGLHTVLVGTSVRTSGVDHALESIHNMKEAFPELWEADEKPENVKCSRKVSIETSVIA* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2310 285 Gene3D - 107 269 IPR023214 -
Apr2g2310 285 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 285 - -
Apr2g2310 285 SUPERFAMILY HAD-like 10 261 IPR036412 -
Apr2g2310 285 CDD HAD_5NT 17 237 IPR010237 -
Apr2g2310 285 Gene3D - 6 99 - -
Apr2g2310 285 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 16 235 IPR010237 -
Apr2g2310 285 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 10 264 - -
Apr2g2310 285 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 188 235 IPR006439 -
Apr2g2310 285 SFLD C1.5.3: 5'-Nucleotidase Like 10 264 IPR010237 -
Apr2g2310 285 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2310 Apr-Chr2 28039714 28042486 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2310 K07025 - gmx:100790444 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2310 2 28039714 28042486 Apr2g2310 2 28039714 28042486 ECH
Apr2g2310 2 28039714 28042486 Apr3g0200 3 3706467 3708454 PCT