Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0195 ATGGGTAGCCCCCCGAAGCAGGACGAAAATAAGGGTTTCTTTGCCACCGTGTCTTCAATGTTCAGCAACGCTATGCAGCGATCCGTCAATGGGCTTCTTGGATATGAAGGTGTAGAAGTCATAAATCCAGAGGGAGGTCAAGATGATGTGGAGGAGGAAGCTCGAAGAGGAAGATGGAAACAGGAGGAAAGAGATGGTTACTGGAAGATGATGCAGAAATATATTGGCTCAGACGTAACATCAATGGTGACACTACCAGTTATTATATTTGAACCAATGACTATGCTTCAGAAAATGGCTGAGTTGATGGAGTACTCCTACTTATTAGATCAGGCAGATGAATCAGAGGATCCATACATGCAATTGGCGTATGCATCATCATGGGCTATATCTGTGTACTTTGCATACCAACGAACCTGGAAGCCTTTTAATCCTATCCTTGGAGAGACCTATGAAATGGTTAACCATGGTGGAATTACATTTCTTGCAGAACAGGTGAGTCATCATCCTCCAATGAGTGCTGGACATGCTGAGAATGAGCATTTTATGTATGATGTTACTTCAAAGTTGAAAACCAAGTTTTTGGGAAATTCTGTAGATGTTTATCCTGTTGGAAGAACACGAGTGACCCTTAAGAGGAATGGTGTAATCTTAGATTTGGTGCCGCCTCCCACAAAGGTCAACAACCTCATATTTGGCCGGACTTGGATTGATTCACCTGGGGAAATGATAATGACAAATTTGACAACTGGAGACAAAGCTGTGCTATATTTTCAACCATGTGGATGGTTTGGAGCTGGTCGATATGAAGTGGATGGATATGTTTATAATTCTTCTGAGGAGCCTAAAATATTAATGACTGGGAAATGGAATGAGTCTATGAGTTATCAACCTTGTGATTCAGAAGGAGAGCCTCTTCCAGGCACAGAATTGAAAGAGGTTTGGCATGTTGCTGATGTTCCACCAGATGATAAATTCCAGTATACATATTTCGCCCATAAAATAAACAGCTTTGACACCGCCCCTAGAAAGCTGTTAGCATCAGACTCTCGTCTACGCCCAGATAGATATGCACTTGAAATGGGTGATCTGTCAAAAGCTGGAACAGAAAAGAGCAGTTTGGAGGACAAGCAGCGTGCTGAAAAGAGAACCCGAGAGGCAAAAGGGGATAACTTCACGCCAAGATGGTTTGATTTAACTGAAGAAGTGACTCCAACTCCTTGGGGTGATTTGGAAATCTATCAATATAATGGTAAATACACTGGACATCGAGCTACTGCAGATAACTCGGGAAGCATTGATGATAATGTTGATGTTAAATCAATTGAATTCAATCCATGGCAGTATGGTAATTTGGCCACGGAATGA 1368 0.4203 MGSPPKQDENKGFFATVSSMFSNAMQRSVNGLLGYEGVEVINPEGGQDDVEEEARRGRWKQEERDGYWKMMQKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLDQADESEDPYMQLAYASSWAISVYFAYQRTWKPFNPILGETYEMVNHGGITFLAEQVSHHPPMSAGHAENEHFMYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRNGVILDLVPPPTKVNNLIFGRTWIDSPGEMIMTNLTTGDKAVLYFQPCGWFGAGRYEVDGYVYNSSEEPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWHVADVPPDDKFQYTYFAHKINSFDTAPRKLLASDSRLRPDRYALEMGDLSKAGTEKSSLEDKQRAEKRTREAKGDNFTPRWFDLTEEVTPTPWGDLEIYQYNGKYTGHRATADNSGSIDDNVDVKSIEFNPWQYGNLATE* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0195 455 SUPERFAMILY Oxysterol-binding protein-like 61 434 IPR037239 -
Apr3g0195 455 MobiDBLite consensus disorder prediction 369 387 - -
Apr3g0195 455 MobiDBLite consensus disorder prediction 362 387 - -
Apr3g0195 455 Gene3D - 148 325 - -
Apr3g0195 455 Pfam Oxysterol-binding protein 67 424 IPR000648 GO:0008289
Apr3g0195 455 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 452 IPR000648 GO:0008289
Apr3g0195 455 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3C-LIKE ISOFORM X1 1 452 - -
Apr3g0195 455 ProSitePatterns Oxysterol-binding protein family signature. 164 175 IPR018494 -
Apr3g0195 455 Gene3D - 356 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0195 Apr-Chr3 3652117 3657843 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0195 - - gmx:100808070 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0195 3 3652117 3657843 Apr3g0195 3 3652117 3657843 ECH
Apr2g2304 2 28000576 28005441 Apr3g0195 3 3652117 3657843 PCT