Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2304 ATGGCTGGCCCCGATAAGATTGAAAATAAGGGCTTTTTCGCTGCCATGACTTCTGGCTTCTCCATGTTCAGCAACGCCATGCATCGATCTGTCAACGGGATGCTGGGATATGAAGGGGTAGAAGTTATAAATCCAGAGGGCGGTCAAGATGATGCAGAAGAGGAAGCTCAGAGAGGAAGATGGAAACCGGAGGAAAGAGATGGTTACTGGAAGATGATGCAAAAATATATTGGCTCAGATGTAACATCAATGGTAACACTACCGGTTATTATTTTTGAACCGATGACTATGCTTCAGAAAATGGCAGAGTTGATGGAGTACTCCTACCTGTTAGAACTGGCAGATGAATGTGAGGACCCATATATGCGGCTGGTGTATGCATCATCATGGGCTATATCTGTGTATTTTGCGTACCAACGAACCTGGAAGCCTTTTAACCCTATCCTTGGAGAGACCTATGAGATGGTTAACCATGGTGGAATCACATTTTTAGCAGAACAGGTGAGTCACCATCCCCCAATGAGTGCTGGGCATGCTGAGAATGAGCATTTTGCATATGATGTGACTTCAAAGTTAAAGACTAAGTTTTTGGGAAATTCTGTTGATGTTTACCCTGTTGGAAGAACGCGTGTAACCCTCAAGAGGGATGGTGTAATCTTAGATTTAGTTCCTCCTCCAACCAAGGTTAATAATCTGATATTTGGCCGAACATGGATTGATTCACCTGGGGAGATGATAATGACAAATTTGACGACTGGGGATAAAGTTGTACTATACTTTCAACCATGTGGATGGTTTGGCGCTGGTCGCTATGAAGTAGATGGATATGTTTATAATTCTGCGGAGGAGCCTAAAATATTGATGACGGGGAAGTGGAATGAGTCTATGAGTTATCAACCTTGTGATTTGGAAGGAGAGCCTCTTCCAGACACAGAATTGAAAGAGGTTTGGCATGTTGCTGATGTTCCACAGAATGATAAATTCCAGTATACATATTTTGCACATAAAATAAACAGCTTCGACACAGCCCCTAAAAAATTGTTGGCGTCAGACTCTCGCTTACGCCCAGATAGATATGCACTTGAGATGGGCGATCTATCCAAATCTGGGGCAGAAAAGACCAGGTTGCTTACCTTTTCTTTCATTCACATTCCACTTGAAAATATGGTAGGTAGTGCATTCTAA 1185 0.427 MAGPDKIENKGFFAAMTSGFSMFSNAMHRSVNGMLGYEGVEVINPEGGQDDAEEEAQRGRWKPEERDGYWKMMQKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLELADECEDPYMRLVYASSWAISVYFAYQRTWKPFNPILGETYEMVNHGGITFLAEQVSHHPPMSAGHAENEHFAYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVILDLVPPPTKVNNLIFGRTWIDSPGEMIMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYNSAEEPKILMTGKWNESMSYQPCDLEGEPLPDTELKEVWHVADVPQNDKFQYTYFAHKINSFDTAPKKLLASDSRLRPDRYALEMGDLSKSGAEKTRLLTFSFIHIPLENMVGSAF* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2304 394 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 374 IPR000648 GO:0008289
Apr2g2304 394 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3C-LIKE ISOFORM X1 1 374 - -
Apr2g2304 394 Pfam Oxysterol-binding protein 69 376 IPR000648 GO:0008289
Apr2g2304 394 Gene3D - 150 327 - -
Apr2g2304 394 SUPERFAMILY Oxysterol-binding protein-like 62 376 IPR037239 -
Apr2g2304 394 ProSitePatterns Oxysterol-binding protein family signature. 166 177 IPR018494 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2304 Apr-Chr2 28000576 28005441 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2304 - - gmx:100779808 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2304 2 28000576 28005441 Apr2g2304 2 28000576 28005441 ECH
Apr2g2304 2 28000576 28005441 Apr3g0195 3 3652117 3657843 PCT