Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2349 ATGGCTTTTCTGTTTGTGTTTGTTGCCATTGTGTTGTGGGGTTGTGCTGCGGGTAAAGAGTGCACAAACAATCTTGCTCAATCACATACTTTCCGTTTCCAGTTATTAACATCCAACAATGAAACTTGGAAGGCAAAGGTGATGTCACTTTATCATTTGACACCAACGGTAGATCATGTTTGGACAGATTTGCCACCAAGGAAATTGTTGAAAGAGGAAGACCAACAACATTGGACTACGATGATGTACGAGAAAATAACAAAAGAGTGTGTGTTGAAGCCACCCCAAGGTTTTCTTAAACAGGTGTCTCTGCATGATGTGAGATTGCAAGAAGGATCAATTCATGCTCAGGCACAACAGACAAACTTGGAGTATCTGTTGATGTTAGATGTGGACAGGTTGCTCTGGAGCTTCAGGAAAACAGCTGGTCTTCCAACACCTGGAATACCATATGGAGGGTGGGAAGATCCAAAAATGGAGATCCGGGGTCATTTTGTTGGGCACTACCTAAGTGCATCAGCTCTTATGTGGGCCAGCACACATAATGATAGCCTGAAGAAGAAAATGTCAGCTCTTGTTGCCAATCTCTCTCTGTGTCAGAAGAAAATAGGCACAGGATATCTCTCTGCCTTTCCATCTGAGTTTTTTGATCGATTTGAAGCTACTAAATATGTTTGGGCTCCCTATTACACCATTCACAAGATCTTGGCTGGCCTTTTGGATCAACATTCTGTAGCTGAAAATCCTCAAGCTCTAAATATGGTGACATGGATGGTTGATTACTTTTACAGCCGAGTGCAGAATGTTATAACAAAGTATAGTATAAGTAGACACTATGAATCACAGAATGAGGAAACTGGAGGAATGAATGATGTCCTTTACAAACTATATAGCATAACGGGAAATCCAAAGCATCTATTGTTGGCTCACCTTTTTGACAAGCCATGCTTTCTAGGATTGCTTGCAATGAAGGCTAATGATATAGCTGATTTTCATGTTAATACACATATCCCAGTGGTTATAGGATCTCAGATGCGCTATGAAGTCACCGGTGATCCACTTTATAAGGAAATTGGAACATTCTTTATGGATCTTGTTAACTCTTCTCACACATATGCAACTGGAGGGACATCGGTTGAAGAGTTTTGGAGTAATCCAAAGAGAATGGCAGACACCCTAAAAACAACGGAGAATGAGGAATCATGCACAACATATAATATGTTGAAGGTTTCACGCCACTTGTTTAGATGGACGAAAAAGGTATCTTATGCAGATTATTATGAGCGTGCCTTAACAAATGGTGTGTTAAGCATTCAAAGAGGAAGAGAACCTGGAGTGATGCTATACATGCTTCCACAGGGTCGTGGGGTTTCCAAAGCTAAAACTAACCTTGGTTGGGGAAACAAATTTGACAGTTTTTGGTGCTGTTATGGAACAGGAATTGAATCATTCTCAAAGCTAGGAGATTCTATCTATTTTGAAGAGGAAGGGGGAAATCCTGCTCTTTACATCATCCAGTACATATCAAGCTTGTTTAATTGGAAGTCAGAACAAATTATCCTTAATCAGACAGTTGTTCCTGTTGCTTCATGGGATCCTTTCCTACGAGTGTCTTTTACATTATCTCCTACCAAGGTGCTTAAAATTTCTACTTCGTCAACACTCAACTTTCGAATACCAACTTGGACGCATAGGGATGGTGCTAAGGGCATGTTAAATAATGAAACTTTATCTCTGCCAACTCCAGGAAATTTTTTATCAATCAAGCGAAGATGGAACGCTGGAGACCAACTGACCCTTCAATTGCCCATTCCGCTCAAAACAGAAACTATAAAAGATGACAGGTCTAAGTATGCCTCTGTTAAAGCAATTCTTTATGGTCCTTATCTTCTTGCTGGTCACACCACTGGTGATTGGGACATTAAAGCTGGACCTAATGCATCTTTGGCAAATTGGATTACTCCAATTTCAGCCAGCTACAATAGTCAGTTATTCTATTTTTCACAAGATTATGCAAACTCAACTTTTGTCTTAACAAACTCAAACCAATCATTTACAATGAAAAATTTGCCCAAGCTTGGAAGTAATTTGGCTCTCCATGCAACTTTTAGAGTTATCCAAAGAGAATCATCTTCAAAATTCTCAACATTAACATATGCTATTGGTAAAACAGTGATGTTAGAGCCATTTGACCATCCAGGAATGAGAGTGATTCACCAGGGAACAGAAAATCCTCTTAGCATTGTAGATTCATCATCTGATGGGTCTTCTGATTTTCTTCTTGTGCCAGGATTAGATGGAAGAAAAGAAACCATATCTTTAGAGTCCAAAAGTCAGAATGGTTGCTTCGTCCATAGTGGTATTCACATTGGCAGAGGAGTGAAACTTAGTTGCAAGTCTAATTCTGATGCTACATTTAAACATTCAACAAGTTTTATTGCAAGGAGAGGATTAACTGAATATAATCCAATCAGTTTTGTGGCCAGAGGGGTAAACAAGAATTTTCTTCTACAGTCATTATTTGCCTTTAGAGATGAGCCCTATACGGTTTATTTCAACATCAAGGATTGA 2571 0.3936 MAFLFVFVAIVLWGCAAGKECTNNLAQSHTFRFQLLTSNNETWKAKVMSLYHLTPTVDHVWTDLPPRKLLKEEDQQHWTTMMYEKITKECVLKPPQGFLKQVSLHDVRLQEGSIHAQAQQTNLEYLLMLDVDRLLWSFRKTAGLPTPGIPYGGWEDPKMEIRGHFVGHYLSASALMWASTHNDSLKKKMSALVANLSLCQKKIGTGYLSAFPSEFFDRFEATKYVWAPYYTIHKILAGLLDQHSVAENPQALNMVTWMVDYFYSRVQNVITKYSISRHYESQNEETGGMNDVLYKLYSITGNPKHLLLAHLFDKPCFLGLLAMKANDIADFHVNTHIPVVIGSQMRYEVTGDPLYKEIGTFFMDLVNSSHTYATGGTSVEEFWSNPKRMADTLKTTENEESCTTYNMLKVSRHLFRWTKKVSYADYYERALTNGVLSIQRGREPGVMLYMLPQGRGVSKAKTNLGWGNKFDSFWCCYGTGIESFSKLGDSIYFEEEGGNPALYIIQYISSLFNWKSEQIILNQTVVPVASWDPFLRVSFTLSPTKVLKISTSSTLNFRIPTWTHRDGAKGMLNNETLSLPTPGNFLSIKRRWNAGDQLTLQLPIPLKTETIKDDRSKYASVKAILYGPYLLAGHTTGDWDIKAGPNASLANWITPISASYNSQLFYFSQDYANSTFVLTNSNQSFTMKNLPKLGSNLALHATFRVIQRESSSKFSTLTYAIGKTVMLEPFDHPGMRVIHQGTENPLSIVDSSSDGSSDFLLVPGLDGRKETISLESKSQNGCFVHSGIHIGRGVKLSCKSNSDATFKHSTSFIARRGLTEYNPISFVARGVNKNFLLQSLFAFRDEPYTVYFNIKD* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2349 856 SUPERFAMILY AbfB domain 725 837 IPR036195 GO:0046373|GO:0046556
Apr2g2349 856 PANTHER PROLINE-TRNA LIGASE (DUF1680) 4 855 - -
Apr2g2349 856 Pfam Beta-L-arabinofuranosidase, GH127 106 632 IPR012878 -
Apr2g2349 856 SUPERFAMILY Six-hairpin glycosidases 163 463 IPR008928 GO:0005975
Apr2g2349 856 PANTHER - 4 855 - -
Apr2g2349 856 Gene3D - 716 852 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2349 Apr-Chr2 28306803 28311899 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2349 K09955 - gmx:100791803 1293.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2349 2 28306803 28311899 Apr2g2349 2 28306803 28311899 ECH
Apr5g0187 5 1695872 1701072 Apr2g2349 2 28306803 28311899 PCT