Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2249 ATGGTATCAATCTTTCGCCAATACACATTCGATGACTCATTCGAACAAGTGTTCGTGTCGAGCAAATTTCTGAAGGAATACCAAATTGCTCTAACTTTCGCGACAGACTACGACGAGAACCATGATCCCACAAACGGGGTGTTCCTACCCACGTGGGATCAAACCAAAGTAACACCCGAATCAATCATACGGTTCAAGGAGGAACATCCCGACGTAAAAGTCAAAGTGTTCGTGAGCATTGGAAACCGGAGCACCCAATTTCCCTTCAAACCCCAAGACAACAATTCATGGATCGCCAATGCCACCAAATCGCTCACCAAAATCATAAAAAGCGAAGACTACAATCTTCAAGTTGATGGCATCGACGTGTTGTACGAACAAATCGATGCCTCACCCAGTGACTTCGTAGAGTGCGTTGGGAACCTTATAAAGAACCTTAAGGAAAGTGGGGTGGTGAGAGAAGCTTCCATTTCTCCATCTTTTTCTCTCAACAAAGACTTTTACTCGTGCTTGTACAGGGGTTTCTCGTTCTTCATTGATTGGGTGGATTACCAGTTCCAAAATGAGGTTACTTCTGTGTTCGAACCCAATAACTTGGTGGAACGGTACAGTGAACTAGTGAAGAATGATTATCCAAGAAGGAAATTGTTTGTTGGATACAGTGCGGAGAACGAGGACTGGGCTACGTTGTCACCCATTGTGTTCTTTCTGGGTGGCATGGACATTCTCAAGAAGAAAAGAGGTGTTGGTGTTTCCATTCATTACCATAATTACTATGCTGAAGCTCCCCCTAAGGAATGA 801 0.4407 MVSIFRQYTFDDSFEQVFVSSKFLKEYQIALTFATDYDENHDPTNGVFLPTWDQTKVTPESIIRFKEEHPDVKVKVFVSIGNRSTQFPFKPQDNNSWIANATKSLTKIIKSEDYNLQVDGIDVLYEQIDASPSDFVECVGNLIKNLKESGVVREASISPSFSLNKDFYSCLYRGFSFFIDWVDYQFQNEVTSVFEPNNLVERYSELVKNDYPRRKLFVGYSAENEDWATLSPIVFFLGGMDILKKKRGVGVSIHYHNYYAEAPPKE* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2249 266 PANTHER CHITINASE 2-LIKE 1 264 - -
Apr2g2249 266 PANTHER RUBISCO-ASSOCIATED PROTEIN 1 264 - -
Apr2g2249 266 Gene3D Glycosidases 2 263 - -
Apr2g2249 266 SUPERFAMILY (Trans)glycosidases 28 232 IPR017853 -
Apr2g2249 266 PRINTS 2-S globulin family signature 19 38 IPR000677 -
Apr2g2249 266 PRINTS 2-S globulin family signature 45 60 IPR000677 -
Apr2g2249 266 PRINTS 2-S globulin family signature 62 80 IPR000677 -
Apr2g2249 266 PRINTS 2-S globulin family signature 103 125 IPR000677 -
Apr2g2249 266 PRINTS 2-S globulin family signature 177 200 IPR000677 -
Apr2g2249 266 Pfam Glycosyl hydrolases family 18 61 232 IPR001223 GO:0005975
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2249 - - gmx:100776259 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2249 2 27621211 27622123 Apr3g1422 3 28811951 28812895 PCT