Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2229 ATGGGAAATAGAGGCACCCTTTTGGTGTTGCTCCTTGTTTTTTGCCATGGTGTGGCAATTACAATGGGGTTTTGGATGACAGAGGGGAAAGAGAGAGAAGAGAGATCTGCAAGGGCAGATAAAATGTTCATGATGCAGAAATCCAAGCGCGTAGCAAAGACTGATGCAGGTGAGATGCGAGTGCTAGAAAGCTATGGTGGTAGGATTTTGGAGAGGGCTTTGAACATTGGTTTCATCACTATGGAACCAAGGTCCCTCTTCATTCCTCAGTATCTTGACTCTAGTTTGATCATATTCCTGCGTACAGGAGAAGCAAAGTTGGGATTCATATACAAAGATGAACTAGCGGAAAGGCATTTGAAGACGGGGGATGTGTATCAAATTCCAGCTGGTTCTGCATTCTATTTGGTGAATATTGAAGAGAGTCAAAGACTTCACATTATCTGCAGCATTGACCCCTCAGAGAGTTTGGGAATTGATATTTTCCAGTCCTTCTATATTGGAGGAGGAGCCAATCCAGCATCGGTACTTTCTGGATTCGAGCCTGAAATCCTTGAAGCTGCTTTTAACGTATCAGGAGCAGATTTGAGAAGACTCCTTAGTAAGCAACATGAAGGCCCAATTGTGCATGTGGGCGATTCACATGCCACAAGCATATGGACCAAGTTCCTTCAACTTAAGGAGGAAGAAAAACTGCAACACCTGAGGAACATGGTGCAAGAACTAGAAGAAGAAAGTGATGAAGAAGAGCAGCAAACAAGTTTTTCATGGAGGAAGCTCTTGGAATCTGTATTTGGTGATGAGAACAAGAACACAAGGGATTATTCTCGTAAATCCCCTCACTCTTGCAACCTCTATGATAGAAAACCAGATTTCATGAACAACTATGGTTGGAGCGTTGCTATAGATGGCTATGATTATTCTCCACTCAAAAGTTCTGGCGTTGGCATTTATCACGTCAATCTCACAGCGGGATCTATGATGTCACCCCATGTGAATCCAAGGGCAACCGAGTATGGCATAGTGTTGAAAGGGTCAGGTAGAATCCAAATTGTGTTTCCAAATGGAAGCAATGCAATGGACACCCACGTCAAAGAAGGAGATGTGTTCTTTATCCCAAGGTACTTTGCGTTCTGCCAAATAGCATCAAGGAATGAACCATTAGAGTTCTTTGGGTTCACCACCTCAGCTCAAAGGAACAAGCCATACTTTTTGGTTGGTGCCACGTCACTTATGAGGACCATGATGGGGCCTGAGCTTGCAGCTGCATTTGGGGTGAGTGAGGACACCATAGATCGTGTGGCTAAGGCCCAACATGAAGCTGTTATTCTACCCACTCCATGGGCAGCACATGAACACCAAAATAGGGAGAAGGTGGATACGCTTCCAAAGCTTATTAGGAATAAGATGATTATGGGTTTTTGA 1425 0.44 MGNRGTLLVLLLVFCHGVAITMGFWMTEGKEREERSARADKMFMMQKSKRVAKTDAGEMRVLESYGGRILERALNIGFITMEPRSLFIPQYLDSSLIIFLRTGEAKLGFIYKDELAERHLKTGDVYQIPAGSAFYLVNIEESQRLHIICSIDPSESLGIDIFQSFYIGGGANPASVLSGFEPEILEAAFNVSGADLRRLLSKQHEGPIVHVGDSHATSIWTKFLQLKEEEKLQHLRNMVQELEEESDEEEQQTSFSWRKLLESVFGDENKNTRDYSRKSPHSCNLYDRKPDFMNNYGWSVAIDGYDYSPLKSSGVGIYHVNLTAGSMMSPHVNPRATEYGIVLKGSGRIQIVFPNGSNAMDTHVKEGDVFFIPRYFAFCQIASRNEPLEFFGFTTSAQRNKPYFLVGATSLMRTMMGPELAAAFGVSEDTIDRVAKAQHEAVILPTPWAAHEHQNREKVDTLPKLIRNKMIMGF* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2229 474 CDD cupin_7S_vicilin-like_C 290 441 - -
Apr2g2229 474 PANTHER OS03G0336100 PROTEIN-RELATED 1 454 - -
Apr2g2229 474 Pfam Cupin 51 194 IPR006045 -
Apr2g2229 474 Pfam Cupin 284 430 IPR006045 -
Apr2g2229 474 PANTHER OS03G0336100 PROTEIN 1 454 - -
Apr2g2229 474 Coils Coil 225 252 - -
Apr2g2229 474 CDD cupin_7S_vicilin-like_N 51 211 - -
Apr2g2229 474 Gene3D Jelly Rolls 275 447 IPR014710 -
Apr2g2229 474 SMART Cupin_1_3 43 197 IPR006045 -
Apr2g2229 474 SMART Cupin_1_3 283 432 IPR006045 -
Apr2g2229 474 SUPERFAMILY RmlC-like cupins 45 441 IPR011051 -
Apr2g2229 474 Gene3D Jelly Rolls 30 222 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2229 Apr-Chr2 27395508 27397764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2229 43 451 Miscellaneous Gene Families AT2G18540 30.751 2.65e-46 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2229 - - gmx:100818796 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2229 2 27395508 27397764 Apr2g2229 2 27395508 27397764 ECH
Apr2g2229 2 27395508 27397764 Apr3g1393 3 28382630 28385362 PCT