Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2208 ATGCGAATCTTCGTTCTGCTTTCGCTCGTAACCCTTCTCTTCTTCTCCTCCTTCTCTCCGATCCTCTGCAAAGACCTCGCCGACGATGAGGATCTAAGCTTCCTCGACGAACCCGATGAACCCTCCAATTCGCATTACAGCCATGACCACTTCGACGACGATGCCAATTTCGACGACTTCTCGGGATTCGAGGAGACATACAAAGAGCCTGAGGTGGACGACAAGGACGTCGTCGTTTTGAAGGAGAAGAATTTCACCGACTTTGTGAAAAACAACCGTTTCGTGATGGTGGAATTCTACGCGCCATGGTGCGGTCACTGCCAGGCCTTGGCTCCTGAGTATGCCGCCGCCGCCACTGAGTTGAAGGGTGAAAATGTCATTTTGGCAAAGGTGGATGCCACTGAGGAAAATGAATTGGCTCAAGAGTATGATGTTCAGGGTTTTCCCACTATCTACTTCTTCATTGATGGCATTCACAAGCCTTATCATGGCCACAGAACCAAAGATGCTATAGTGACGTGGATTAAGAAGAAGGTAGGGCCTGGTATACACAATATAACTACATTGGATGATGCTCAACGCATATTGACCAATGAAAGTAAAATTGTTTTGGGCTTTCTCAACTCTCTAGTTGGTCCTGAAAGTGAGGAGCTTGCTGCTGCTTCAAGGCTTGAGGATGATGTCAATTTCTATCAAACTGTGAATCCTGATGTGGCAAAACTTTTCCATATTGACCCAGATGTTAAACGCCCGGCTTTAATTCTGATAAAGAAAGAAGAGGAAAAACTGAATCACTTTGATGGGCAATTTGTTAAGTCGGCAATAGCAGATTTTGTCTTCTCCAACAAGCTTCCTTTGGTAACTATTTTTACTAGAGAAAGTGCCCCATCAGTCTTTGAAAATCCAATCAAGAAACAGTTGTTGCTGTTTGCGACTTCAAATGATTCAGAGAAGTTCATCCCAGTATTTCAAGAAGCATCAAAATCTTTCAAGGGAAAGTTGATCTTTGTATATGTGGAAATGGATAATGAAGATGTTGGAAAGCCTGTTTCAGATTACTTTGGTATCAGTGGGAGTGCTCCAAAAGTACTTGCATACACTGGAAATGATGATGGAAAAAAATTTGTGTTTGATGGAGAGGTGACTGTTGACAAAATTAAGGCATTTGGGGAAGATTTCCTTGAAGACAAGCTAAAACCTTTTTTCAAGTCAGATCCAGTTCCTGAAAGTAATGATGGTGATGTGAAAATAGTAGTTGGGAATAACTTTGATGAAATTGTTTTGGATGAGTCAAAGGATGTTCTTCTTGAGATCTATGCTCCCTGGTGTGGCCATTGCCAAGCACTAGAACCAATATACAACAAGCTTGCAAAACATCTTCGTGGTATTGAGTCTATTGTTATAGCCAAGATGGATGGAACAACAAATGAGCATCCCAGGGCAAAGCCTGATGGATTCCCCACTCTTCTCTTCTTCCCAGCAGGAAACAAGAGTTTTGACCCTATTACTGTTGACACTGATCGTACAGTGGTAGCCTTTTATAAGTTCCTAAAGAAACATGCATCAATTCCATTCAAGCTCCAGAAACCAACCTCAAGTTCTAAATCCGAGAGCCCTGATGCCACAGAGAGCTCTGATGTCAAAGAGAGTCAGAGTAGCAATAGTGATGGGAAGGATGAATTATGA 1686 0.4259 MRIFVLLSLVTLLFFSSFSPILCKDLADDEDLSFLDEPDEPSNSHYSHDHFDDDANFDDFSGFEETYKEPEVDDKDVVVLKEKNFTDFVKNNRFVMVEFYAPWCGHCQALAPEYAAAATELKGENVILAKVDATEENELAQEYDVQGFPTIYFFIDGIHKPYHGHRTKDAIVTWIKKKVGPGIHNITTLDDAQRILTNESKIVLGFLNSLVGPESEELAAASRLEDDVNFYQTVNPDVAKLFHIDPDVKRPALILIKKEEEKLNHFDGQFVKSAIADFVFSNKLPLVTIFTRESAPSVFENPIKKQLLLFATSNDSEKFIPVFQEASKSFKGKLIFVYVEMDNEDVGKPVSDYFGISGSAPKVLAYTGNDDGKKFVFDGEVTVDKIKAFGEDFLEDKLKPFFKSDPVPESNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQALEPIYNKLAKHLRGIESIVIAKMDGTTNEHPRAKPDGFPTLLFFPAGNKSFDPITVDTDRTVVAFYKFLKKHASIPFKLQKPTSSSKSESPDATESSDVKESQSSNSDGKDEL* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2208 561 PANTHER PROTEIN DISULFIDE ISOMERASE 52 552 - -
Apr2g2208 561 ProSitePatterns Thioredoxin family active site. 96 114 IPR017937 -
Apr2g2208 561 ProSitePatterns Thioredoxin family active site. 435 453 IPR017937 -
Apr2g2208 561 MobiDBLite consensus disorder prediction 528 551 - -
Apr2g2208 561 MobiDBLite consensus disorder prediction 528 561 - -
Apr2g2208 561 CDD PDI_a_PDI_a'_C 415 517 - -
Apr2g2208 561 CDD PDI_a_family 78 175 - -
Apr2g2208 561 Pfam Thioredoxin 415 500 IPR013766 -
Apr2g2208 561 Pfam Thioredoxin 77 177 IPR013766 -
Apr2g2208 561 TIGRFAM ER_PDI_fam: protein disulfide isomerase 75 561 IPR005792 GO:0003756
Apr2g2208 561 SUPERFAMILY Thioredoxin-like 411 522 IPR036249 -
Apr2g2208 561 Gene3D Glutaredoxin 284 408 - -
Apr2g2208 561 SUPERFAMILY Thioredoxin-like 282 412 IPR036249 -
Apr2g2208 561 Gene3D Glutaredoxin 64 179 - -
Apr2g2208 561 PANTHER PROTEIN DISULFIDE-ISOMERASE 52 552 - -
Apr2g2208 561 ProSiteProfiles Thioredoxin domain profile. 51 180 IPR013766 -
Apr2g2208 561 ProSiteProfiles Thioredoxin domain profile. 393 522 IPR013766 -
Apr2g2208 561 Gene3D Glutaredoxin 409 523 - -
Apr2g2208 561 TIGRFAM pdi_dom: protein disulfide-isomerase domain 80 178 IPR005788 GO:0003756
Apr2g2208 561 CDD PDI_b'_family 304 394 - -
Apr2g2208 561 PRINTS Thioredoxin family signature 95 103 - -
Apr2g2208 561 PRINTS Thioredoxin family signature 103 112 - -
Apr2g2208 561 PRINTS Thioredoxin family signature 144 155 - -
Apr2g2208 561 CDD PDI_b_family 183 282 - -
Apr2g2208 561 SUPERFAMILY Thioredoxin-like 185 294 IPR036249 -
Apr2g2208 561 Pfam Thioredoxin-like domain 218 389 - -
Apr2g2208 561 SUPERFAMILY Thioredoxin-like 70 180 IPR036249 -
Apr2g2208 561 Gene3D Glutaredoxin 180 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2208 Apr-Chr2 27237434 27241483 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2208 K09580 - gmx:100804924 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2208 2 27237434 27241483 Apr2g2208 2 27237434 27241483 ECH
Apr2g2208 2 27237434 27241483 Apr3g1365 3 28149967 28154473 ECH
Apr2g2208 2 27237434 27241483 Apr3g1365 3 28149967 28154473 PCT