Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2193 ATGGAGAAAGAAACAGAGATGAAGCAATCCAAGTTCAAGAGGATTTGTGTGTTCTGTGGCAGTAGTCCAGGGAACAAAACTAGTTATAAGGATGCTGCTATTGAGCTTGGAAGGGAATTGGTGTCAAGAAATATTGATCTAGTGTATGGAGGGGGCAGCATTGGTTTGATGGGGTTGATTTCTCAGGCTGTTTATGATGGTGGTCGCCATGTAATTGGAGTTATTCCCAAGACACTTATGCCAAGAGAGCTTACTGGAGAAACAGTGGGGGAAGTGAAGGCTGTAGCAGACATGCATCAAAGGAAAGCAGAGATGGCTAGGCGCTCTGATGCCTTTATTGCCTTACCCGGTGGTTATGGGACACTTGAAGAACTCCTTGAGGTGATAACGTGGGCTCAACTTGGCATCCATGATAAACCGGTGGGATTGCTGAATGTTGATGGATACTACAATACATTTTTGTCTTTCATTGACAAAGCTGTGGAGGAAGGCTTCATCAGCCCCACCGCACGCCATATAATTGTATCCGCCCCAACACCAAAAGAGCTTGTCAAAAATATGGAGGAATATTTCCCACAACACGAAAGAGTTGTATCCAAGGTTAGCTGGGAAAATGAACAGCTACATTAG 630 0.446 MEKETEMKQSKFKRICVFCGSSPGNKTSYKDAAIELGRELVSRNIDLVYGGGSIGLMGLISQAVYDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMARRSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNTFLSFIDKAVEEGFISPTARHIIVSAPTPKELVKNMEEYFPQHERVVSKVSWENEQLH* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2193 209 Pfam Possible lysine decarboxylase 57 187 IPR031100 -
Apr2g2193 209 Gene3D - 2 189 - -
Apr2g2193 209 SUPERFAMILY MCP/YpsA-like 11 190 - -
Apr2g2193 209 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 1 209 - -
Apr2g2193 209 PANTHER LOG FAMILY PROTEIN YJL055W 1 209 - -
Apr2g2193 209 TIGRFAM TIGR00730: TIGR00730 family protein 13 190 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2193 Apr-Chr2 27110302 27114057 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2193 K22522 - gmx:100811156 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2193 2 27110302 27114057 Apr2g2193 2 27110302 27114057 ECH
Apr2g2193 2 27110302 27114057 Apr3g1350 3 28019981 28025132 ECH
Apr2g2193 2 27110302 27114057 Apr3g1350 3 28019981 28025132 PCT