Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2126 ATGCAGACTCTTTCGCCGCCCGCTTCCAACGCACTCAATCTAAAGCATGTTCTTCGCCCGCGCCTTTCCCCAAATCGCCTTGGGCCGGCTCGAGTTTCCGTCAAATGCGCTTCCGGGTTCGAATCTTCGGGCTACGGGGTCGGCTCGAGCCGAGCCGATTGGCAGAGCTCATGCGCCATCTTAGCCAGCAAGGTTGTTTCTCAGGAAAAATCATCTACAGACAAGAACGATGGCACTGCCGACCACGTCGCCGCCGTCAACGGCCACAAAACCGCTGTAAGCGACCTCAAGCTCGTTCCCATCGGAAACCTCGGCGAAGGAGAGAACAACAAGCCGATTCCGCCGAAGCCGCTAACCATCTCGGACCTGTCGCCGGCTCCGATGCACGGCTCGAAGCTCCGCGTGGCGTACCAAGGCGTCCCCGGCGCGTACTCGGAAGCCGCCGCTGGCAAAGCCTATCCGAACTGCGAAGCCATTCCGTGTGACCAATTCGAGGTGGCGTTCCAAGCGGTGGAGCTCTGGATCGCCGATCGAGCCGTTCTTCCGGTAGAAAACTCCCTCGGCGGCTCGATTCACCGGAACTACGACCTCCTCCTCCGCCACCGCCTCCACATCGTCGGCGAGGTCCAACTCCCCGTCCACCACTGCCTCCTCGCTCTCCCTGGAGTCCGAAAGGAGTTTCTCACTCGCGTCATTTCGCATCCTCAAGCACTCGCTCAGTGCGAACACACGCTCACGAAGCTCGGCATCAACGTCGCGCGCGAAGCCGTCGACGACACCGCGGGCGCCGCCGAGTTCGTGGCCACGAACGGGCTCCGAGACACGGCGGCGATCGCTAGCGCACGCGCGGCGGAGCTCTACGGTTTGCAAGTGATGGCTGATGGAATACAAGACGACCCGAGTAACGTGACCCGATTCGTTATGTTGGCCCGAGAACCCATCATTCCACGCACGGATCGACCTTTCAAAACGAGCATTGTTTTCGCTCACGATAAGGGTACTTCGGTCCTTTTCAAAGTGCTTTCCGCGTTTGCGTTTCGGAACATTAGCTTGACCAAGATTGAATCGAGGCCGCATAGGAACCGTCCGATTCGGCTTGTTGATGATGCAAACGTGGGAACTGCGAAGCACTTTGAGTATTTGTTCTACGTTGATTTTGAGGCTTCCATGGCTGAGGTTAGGGCTCAGAACGCGTTGGCGGAAGTGCAGGAGTTCACCTCTTTCTTGCGAGTGTTAGGGAGTTACCCTATGGACATGACACCGTGGACCCCTTCTTCTCGGGGAGATTAG 1290 0.5829 MQTLSPPASNALNLKHVLRPRLSPNRLGPARVSVKCASGFESSGYGVGSSRADWQSSCAILASKVVSQEKSSTDKNDGTADHVAAVNGHKTAVSDLKLVPIGNLGEGENNKPIPPKPLTISDLSPAPMHGSKLRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEFLTRVISHPQALAQCEHTLTKLGINVAREAVDDTAGAAEFVATNGLRDTAAIASARAAELYGLQVMADGIQDDPSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYLFYVDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWTPSSRGD* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2126 429 ProSiteProfiles ACT domain profile. 325 416 IPR002912 -
Apr2g2126 429 CDD ACT_CM-PDT 323 416 - -
Apr2g2126 429 Gene3D - 318 419 - -
Apr2g2126 429 Gene3D - 129 217 - -
Apr2g2126 429 CDD PBP2_Ct-PDT_like 132 313 - -
Apr2g2126 429 SUPERFAMILY ACT-like 306 418 IPR045865 -
Apr2g2126 429 ProSitePatterns Prephenate dehydratase signature 1. 287 309 IPR018528 GO:0004664|GO:0009094
Apr2g2126 429 SUPERFAMILY Periplasmic binding protein-like II 134 317 - -
Apr2g2126 429 Pfam Prephenate dehydratase 135 313 IPR001086 GO:0004664|GO:0009094
Apr2g2126 429 Gene3D - 218 299 - -
Apr2g2126 429 PANTHER AROGENATE DEHYDRATASE 37 426 - -
Apr2g2126 429 ProSiteProfiles Prephenate dehydratase domain profile. 134 311 IPR001086 GO:0004664|GO:0009094
Apr2g2126 429 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 37 426 - -
Apr2g2126 429 ProSitePatterns Prephenate dehydratase signature 2. 351 358 IPR018528 GO:0004664|GO:0009094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2126 Apr-Chr2 26448839 26450713 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2126 K05359 - gmx:100781285 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2126 2 26448839 26450713 Apr2g2126 2 26448839 26450713 ECH
Apr2g2126 2 26448839 26450713 Apr3g1277 3 27231369 27233378 PCT