Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2110 ATGGCGGAGCTTGGAAGTGTTAGGGAATTCCTCGCCGGAAAGAGCGTTTTAGTGACTGGTGCAACAGGATTCCTAGCCAAAATTCTTGTGGAGAAGATATTAAGGATTCAACCAAACATTAAAAACTTATACCTCCTTGTAAGAGCATCAAGTCCTGATTTAGCTTCCCAACGCTTGCACAATGAGATCTTTGGGAAGGACTTGTTCAGGGTGCAACGTGATAAATGGGGTGCAGATTTTAGTTCCTTTATATCCAAGAGAGTAGTGGCTGTTGCAGGCGATGTGTCTCTTGAAAAGTTGGGAGTAAAAGACGAAAACCTTTGTGAAAAGATGTTGGAAGAGATAAATATTGTAGTACATGCTGCCGCAACTACCAAGCTTGATGAGAGATACGATGTTGCAATGGGTACCAATATGGTGGGAGCTTTTAATGTTTTGAACTTCGCCAAAAGTTGTCGTAAGATAGAGGTTCTTCTTCATGTATCTACTGCTTATGTGAGTGGACAGCCGAAAGGACATATAACTGAGGAACCCTTCCGTATGGGTCAGACGCTAAAAATATCTTCAAGATTAGACATCAACTTAGAAAAGCAGTTGATAGAGGAAAAATTGAGTGAACTTCAAGCAGAGAATTCCAATGAAGAAACAATCACGTCAATAATGAAGAAATTTGGAATTATAAGGGCAAGGTTGCATGGATGGCCAAACACCTATGTATTTACCAAAGCAATGGGAGAGATGATTGTAGCAAATATGAAAGAAAATCTACCTTTGATCATTGCACGTCCCACAATGGTACTCAGCACTCGCTCTGAACCCTTTCCGGGTTGGATTGAAGAAGTGAGAACTATGGACTTTTTGGTTGTTGAGTATTGTAAAGGAATGATAACAAGCTTTGTTGGTCATCCAACGACAATCATAGATGTGATACCTGCAGACATGGTGATAAATTCTATGATCATAGCATTGGTAACTTATTCTAAAACTTCTTCCAAGAGTTTGATCTACCATATTGGCTCTTCTTTCAGAAATCCCTTCAAACTTTCCGACCTTTAAGATATTATGTATTGTTATTTTTCAAATAATCTATGGCTAAGCAAATATAGAAAGCCATCAACTGTCACCAAAAAACTAACATTATACTCCACCAGCTTGGATGAGTTTCACCAAAATAAGGTACTACTGTATTGTGCTGTTTATTGCACTGAATAA 1212 0.387 MAELGSVREFLAGKSVLVTGATGFLAKILVEKILRIQPNIKNLYLLVRASSPDLASQRLHNEIFGKDLFRVQRDKWGADFSSFISKRVVAVAGDVSLEKLGVKDENLCEKMLEEINIVVHAAATTKLDERYDVAMGTNMVGAFNVLNFAKSCRKIEVLLHVSTAYVSGQPKGHITEEPFRMGQTLKISSRLDINLEKQLIEEKLSELQAENSNEETITSIMKKFGIIRARLHGWPNTYVFTKAMGEMIVANMKENLPLIIARPTMVLSTRSEPFPGWIEEVRTMDFLVVEYCKGMITSFVGHPTTIIDVIPADMVINSMIIALVTYSKTSSKSLIYHIGSSFRNPFKLSDL*DIMYCYFSNNLWLSKYRKPSTVTKKLTLYSTSLDEFHQNKVLLYCAVYCTE* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2110 402 Gene3D - 6 382 - -
Apr2g2110 402 Pfam Male sterility protein 18 319 IPR013120 -
Apr2g2110 402 PANTHER MALE STERILITY PROTEIN 2-RELATED 7 393 IPR026055 GO:0080019
Apr2g2110 402 PANTHER FATTY ACYL-COA REDUCTASE 7 393 - -
Apr2g2110 402 CDD FAR-N_SDR_e 14 361 - -
Apr2g2110 402 Coils Coil 190 217 - -
Apr2g2110 402 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 338 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2110 Apr-Chr2 26314625 26319591 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2110 9 382 Acyl Lipid Metabolism Gene Families AT5G22500 49.468 5.19e-135 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2110 K13356 - gmx:100804063 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2110 2 26314625 26319591 Apr2g2110 2 26314625 26319591 ECH
Apr2g2110 2 26314625 26319591 Apr3g1258 3 27048454 27052571 PCT