Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2076 ATGATTCCACCACCAACAAAACAACCCTTCGCTTCCTTCATCTTCTTTATTCTCCTCCTCCTCATCGTCCTCATCTCAAAGCCAAAACAGATTCACTTTTCTGAAATGGGTGTGCTGGACGAAGACCCCAATTCAAAACCCATCTTGATCCGCGAGGTGTGGGCCTCCAATCTAGAATCCGAATTCGAGGTTATTCGCGAATTGATCGACAACTACCCTTTCATTTCCATGGACACCGAATTCCCAGGCGTTATTTTCCGCCCCCACGTGGACCCCACTAAACCCTACCTCCGCCGCCACCTCCAACCCTCCGACCACTACCGTTTCCTCAAGTCCAACGTGGATACCCTCAACCTTATCCAAGTCGGTCTCACCCTCTCCGATTTCAACGGGAACCTACCCAACCTCGGAACCGGCAACCGTTTCATCTGGGAATTCAACTTCAGCGACTTCGACGTCGAGCGTGACGCTCACGCGCCGGACTCAATCACTCTCCTCCGGCGCCAGGGGATCGATTTCCGCCGCAACGCCGCCGAGGGAGTGGACTCGGCGCGGTTCGCGGAGCTGATGATGTCGTCGGGGCTTGTCTGCAACGAGTCGGTGAGTTGGGTGACGTTTCACAGCGCCTACGATTTCGGGTATTTGGTTAAGATCCTGACCCGACGGAGCCTGCCGAACGGGTTGGAGGAATTTCTGAGGATGTTGAGGGCGTTTTTCGGAAACAATGTTTATGACATCAAACACATGATGCGGTTCTGCGACACCCTGTACGGCGGTTTGGACCGGCTTGCTCAGAGCCTGAACGTGAACCGGGCGGTTGGGAAATGCCACCAAGCTGGGTCTGACAGCTTGTTGACGTGGCATGCGTTTCAGAAATTGATAGACATTTATTTCGTGAAGGATGGGCCCCAGAAACATGCGGGTGTGTTGTTCGGATTAGAGCTCACTTGTTCTGTCAGTTAA 963 0.5337 MIPPPTKQPFASFIFFILLLLIVLISKPKQIHFSEMGVLDEDPNSKPILIREVWASNLESEFEVIRELIDNYPFISMDTEFPGVIFRPHVDPTKPYLRRHLQPSDHYRFLKSNVDTLNLIQVGLTLSDFNGNLPNLGTGNRFIWEFNFSDFDVERDAHAPDSITLLRRQGIDFRRNAAEGVDSARFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPNGLEEFLRMLRAFFGNNVYDIKHMMRFCDTLYGGLDRLAQSLNVNRAVGKCHQAGSDSLLTWHAFQKLIDIYFVKDGPQKHAGVLFGLELTCSVS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2076 320 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 45 315 IPR039637 GO:0004535|GO:0030014
Apr2g2076 320 SUPERFAMILY Ribonuclease H-like 50 312 IPR012337 -
Apr2g2076 320 Pfam CAF1 family ribonuclease 53 182 IPR006941 -
Apr2g2076 320 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED 45 315 - -
Apr2g2076 320 Gene3D - 39 316 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2076 Apr-Chr2 26059030 26060181 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2076 K12581 - gmx:100817875 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2076 2 26059030 26060181 Apr2g2076 2 26059030 26060181 ECH
Apr2g2076 2 26059030 26060181 Apr3g1212 3 26646580 26647707 PCT