Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2044 ATGGATTGCCGCATCTATGGCGTCTCAATCTGCACTCATCTTCTGTTCCTCTTCCTCCTTTCGCAAGCATTATCGGAAAACCCAAAGCTGCGGGTCACTTCTTCTTCTTCCTCACCGACGGGTCAGATTAACTCAAATTCAGTTCTAGTGGCTCTTCTTGACTCGCATTACACTGAACTCGCAGAACTCGTCGAAAAGGCCATGCTATTGCAAACGCTTGAAGACACCGTCGCTACACACAACATCACAATCTTCGCTCCCACGAACGAAGCTCTAGACCGCAACCTCGACCCTGATTTCAAACGCTTTCTTCTTGAACCTGCTAATCTCAACTCACTCCAAACGCTTCTTCTCTTCCACATCATCCCCACCCAAATCGGATCCAAAACCCTATCCGAATTAACCCGCCACGTCACGCTCTCCAATCACCACCTGTATTTGGCCAGAAACACCACCACCGGAGAATGGACCGTCGACCTGGCCAAGGTCACCCACCCGAATGTTATGACCCGACCCGACGGAGTCATCCATGGGATCGAGCGTCTCCTCGTTCCTCGCTCCGTCGAGGACGAATTCAACCGTCGCCGGAGCCTCCGTTCCATCACCGCCGTTAAACCGGAGGGAGCCCCGGAGGTTGACCCGAGGACTCAACGTCACAAGAAGCTTCCCCCGCCGGCGAAGCCCGGTTCTCCGCCGGTGTTGCCGATCTACGACGCCATGGCTCCGGGACCGTCACTGGCTCCGGCTCCGGCGCCGGGACCGGGAGGGCCGCACCACCACTTCAACGGCGAGAGGCAAGTAAAGGATTTCATTCAGACGCTGCTTCATTACGGCGGGTACAACGAAATGGCCGACATTCTAGTGAATCTAACGTCGTTAGCTACGGAAATGGGTCGGTTAGTGTCGGAGGGTTACGTTCTCACTGTTTTGGCACCAAACGACGAGGCCATGGCAAAGTTGACGACGGAGCAGTTGAGTGAACCGGGTGCGCCGGAGCAGATAATGTACTATCACCTGATACCGGAGTACCAGACGGAAGAGAGCATGTACAATGCAGTTCGAAGGTTCGGGAAGGTTCGTTACGACACGCTGCGTTTGCCGCACAAGGTGGTGGCTCAGGAAGCCGATGGATCGGTTAAATTCGGGTATGGTGACGGGTCGGCTTATTTGTTCGACCCGGATATCTATACGGACGGTCGGATCTCGGTTCAGGGGATTGATGGGGTTTTGTTTCCGATGGAGGAGGAAGCAGAGCGGGTTAAACCCGCTACCCGAACGGGTCAACCCGCCAAAGTTGTTAAGCACAGGAGAGGAAAATTGCTGGAAGCAGCGTGCTGGATGCTTGGAACCTTTGGACAGCATTCTAGACTCGCCTATTGTCAATGA 1386 0.5447 MDCRIYGVSICTHLLFLFLLSQALSENPKLRVTSSSSSPTGQINSNSVLVALLDSHYTELAELVEKAMLLQTLEDTVATHNITIFAPTNEALDRNLDPDFKRFLLEPANLNSLQTLLLFHIIPTQIGSKTLSELTRHVTLSNHHLYLARNTTTGEWTVDLAKVTHPNVMTRPDGVIHGIERLLVPRSVEDEFNRRRSLRSITAVKPEGAPEVDPRTQRHKKLPPPAKPGSPPVLPIYDAMAPGPSLAPAPAPGPGGPHHHFNGERQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTEQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGYGDGSAYLFDPDIYTDGRISVQGIDGVLFPMEEEAERVKPATRTGQPAKVVKHRRGKLLEAACWMLGTFGQHSRLAYCQ* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2044 461 MobiDBLite consensus disorder prediction 201 232 - -
Apr2g2044 461 SUPERFAMILY FAS1 domain 246 413 IPR036378 -
Apr2g2044 461 Pfam Fasciclin domain 292 410 IPR000782 -
Apr2g2044 461 Pfam Fasciclin domain 56 185 IPR000782 -
Apr2g2044 461 Gene3D FAS1 domain 48 186 IPR036378 -
Apr2g2044 461 SMART fasc_3 308 413 IPR000782 -
Apr2g2044 461 SMART fasc_3 83 186 IPR000782 -
Apr2g2044 461 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 1 461 - -
Apr2g2044 461 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 1 461 IPR044654 -
Apr2g2044 461 ProSiteProfiles FAS1/BIgH3 domain profile. 44 183 IPR000782 -
Apr2g2044 461 Gene3D FAS1 domain 260 412 IPR036378 -
Apr2g2044 461 ProSiteProfiles FAS1/BIgH3 domain profile. 267 395 IPR000782 -
Apr2g2044 461 SUPERFAMILY FAS1 domain 47 186 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2044 Apr-Chr2 25760822 25764030 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2044 - - gmx:100782264 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2044 2 25760822 25764030 Apr3g1182 3 26324241 26328762 PCT