Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2034 ATGAATATGGCGAATGAAAACACTCTTCCTCTCTACGATAAAATTTGGGTGAAGCACACCGTTTCAAGGGTGTTTGATTCCCTCACTTTGCTCCTTCTCCTCTCGCTTCTTGGTTACCGCGTTTTCTCTCGTGACAACCATAGCTTCCCCTGGTTTGTAGCTTTCATATGCGAGTCATGGTTCACTTTAACTTGGATTATCGTCATCAGCACCAAATGGACTCCAGCATTTACCAAATCCTACATACACCGTCTCTTGCCCCGATTCATTTTTTTCAATAGCGTACCTGACCTTCCCCCAGTGGATTTATTTGTGACAACGGCTGACCCAGGGCTTGAACCACCCATTATCACAATCAACACTGTGTTGTCTCTGTTGGCACTTGATTATCCAGCTAACAAGCTAGCTTGCTATGTTTCTGATGATGGATGCTCCCCTCTTACCTTCTTTGCGCTTGTTGAAGCCTCTAAATTTGCTAAGCTTTGGGTACCTTTCTGTAAGAAGTACGATATACAAGTTAGAGCACCCTTCAGATACTTCTCTAATGACACTATTGCTAACAAAGGTGGAGAGTCATCGGAATTTATTCAAGAATCGTTAAGAATGAAGGAAAAGTATGAGCAGCTAACTCGTGAAATTGAAAACGCAGCACGACAGTCAGTTCCACTTGTCGGAGAATTCGCTTTTTTCTCAAATACAAATCTGGGAAATCATCCAACCATAATTAAGGTAATATGGGAGAACAAGGAAGGTCATTCAGATGGGTTACCACACTTAATCTACGTATCTAGAGAGAAGAAGCCCGAACATCCACATAATTTCAAAGCTGGTGCTATGAATGTGTTGACAAGAGTCTCTGGGTTGATGACAAATGCTCCCTTTATCCTGAACGTAGATTGTGACATGTATGTGAATAATCCAAAGATTGCACTGCACGCCCTGTGCATTTTATTAGATTCAAAGGGAGAAAAAGAAGTTGCATTTGCCCAATGTATCCAGCAATTCTACGATGGACTAAAGGATGATCCTTTAGGAAATCAGCTTGTGGCTGCTTTTACGTACATGGGAGGTGGATTAGCAGGAATGCAAGGGATATTTTATGTGGGAACAAATTGTTTCCATAGAAGAAAAGTAATTTACGGTCTTTCTCCAGATCAGAATATTCAAAATGGAAGGAACGATCTTCATGTTACCAACGGGAAATTATTAGAAAAGGAAAAAATATTTGGAACTTCAAAAGGGTTTGTGGAATCAGCTGCTGATGCTTTGGAAGGGAAGACATTTAGTTCCAATAATGACCTTTGCAACTCTCTTGAGGCAGCGAAAGAAGTTGCGAGTTGTGGATATGAATACGGCACTGCTTGGGGGACACAGGTGGGTTGGGCCTATGGATCAACTTCAGAAGATTTACTTACTGGACTAAAGATCCACAAAAAAGGTTGGAGATCTGAAGTGTGTTCACCAGACCCAATAGCCTTCATGGGCTGCTCACCGCAAGATATCCTAGGAGTAATAGGCCAGCAAAAGAGATGGGCCTCAGGGTTGGTTGATATCCTCCTAAGCAAGCACTGTCCTATTTTTTGCACCCTATTTGGTAAGCTCCAATTCAGAGAGTGCTTGGGCTATCTTTGGGTCAGTAGTTGGGCTTTACGATCTGTCCCAGAAATATGTTATGCTGCTCTCCCTGCCTATTGCATCTTTACCAATTCCAGCTTCTTGCCTAAGGAACGCAACCTATGGATCCCTGCTTCTCTATTCATGATCTACAACATATCTACTCTATTGGAATACTTGAAAATGGGGATTTCGATTAGAACATGGTGGAACAACCAAAGGATGGCACGAATAACAACCATGAATACTTGGTTTTTTGGATTATTGTCCATCATACTTAAGCGGTTGAGGATATCTGACACAGTCTTTGTTGTAACTAGGAAAGACCAAGCATCTTTTAGTGAGGGCACTAATGAAAATGCTGGTAGGTTCATTTTCGATGAGTCTCCAACTTTTATACTTGGAACCACCATTTTGCTTGTTCAACTTACAGCGTTGCTTATCTATTGTTTGGGATTGCAACCCCCGGTTAGAAGTGGGCATGGATCAGGTGTAGGTGAAGTGTTATGTAGTGCATATTTGGTTGCATGCTATTGGCCATTTTTGAAAGGTTTGTTCCAGAAAGGAAAGTATGGGATTCCCTTATCCACAATATGCAAGTCAACAGTGTTGGCTTTTATTTTTGTGCACTTCTGTAAAAGTGCCATTAGGGGTTGA 2271 0.417 MNMANENTLPLYDKIWVKHTVSRVFDSLTLLLLLSLLGYRVFSRDNHSFPWFVAFICESWFTLTWIIVISTKWTPAFTKSYIHRLLPRFIFFNSVPDLPPVDLFVTTADPGLEPPIITINTVLSLLALDYPANKLACYVSDDGCSPLTFFALVEASKFAKLWVPFCKKYDIQVRAPFRYFSNDTIANKGGESSEFIQESLRMKEKYEQLTREIENAARQSVPLVGEFAFFSNTNLGNHPTIIKVIWENKEGHSDGLPHLIYVSREKKPEHPHNFKAGAMNVLTRVSGLMTNAPFILNVDCDMYVNNPKIALHALCILLDSKGEKEVAFAQCIQQFYDGLKDDPLGNQLVAAFTYMGGGLAGMQGIFYVGTNCFHRRKVIYGLSPDQNIQNGRNDLHVTNGKLLEKEKIFGTSKGFVESAADALEGKTFSSNNDLCNSLEAAKEVASCGYEYGTAWGTQVGWAYGSTSEDLLTGLKIHKKGWRSEVCSPDPIAFMGCSPQDILGVIGQQKRWASGLVDILLSKHCPIFCTLFGKLQFRECLGYLWVSSWALRSVPEICYAALPAYCIFTNSSFLPKERNLWIPASLFMIYNISTLLEYLKMGISIRTWWNNQRMARITTMNTWFFGLLSIILKRLRISDTVFVVTRKDQASFSEGTNENAGRFIFDESPTFILGTTILLVQLTALLIYCLGLQPPVRSGHGSGVGEVLCSAYLVACYWPFLKGLFQKGKYGIPLSTICKSTVLAFIFVHFCKSAIRG* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2034 756 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 5 754 - -
Apr2g2034 756 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 203 385 IPR029044 -
Apr2g2034 756 Coils Coil 199 219 - -
Apr2g2034 756 SUPERFAMILY Nucleotide-diphospho-sugar transferases 116 520 IPR029044 -
Apr2g2034 756 Pfam Cellulose synthase 101 390 IPR005150 GO:0016020|GO:0016760|GO:0030244
Apr2g2034 756 Pfam Cellulose synthase 404 746 IPR005150 GO:0016020|GO:0016760|GO:0030244
Apr2g2034 756 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 5 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2034 Apr-Chr2 25673499 25684150 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2034 10 749 Glycosyltransferase AT2G32530 47.036 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2034 - - gmx:100780817 1189.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2034 2 25673499 25684150 Apr2g2034 2 25673499 25684150 ECH
Apr3g1176 3 26287449 26293787 Apr2g2034 2 25673499 25684150 PCT