Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2033 ATGGACATCCTTGTTTTACTACTCCTTCTCATGCTTCTCAGTGTCCGTTTTTTCTCCATCAACACCTTCACTCTTCCATGGTTCCTTGCTTTCTTATGCGAATCTTGGTTCACCTTCACTTGGATTGTCATTCTCAACGCCAAATGGAGTCCTGCAATAACTATAACCCACATAGACCGTCTCATGCAACGGTTAGTTGAGGTTCCGCGAGTTGACTTGTTTGTGACAACAGCAGATCCTATACTTGAACCCCCCATCGTCACAGTGAACACAGTGTTGTCTCTTATGGCACTTGATTATCCTACTAACAAGCTTGCTTGCTATGTTTCTGATGATGGTTGTTCTCCTCTTACGTACTATGCCCTTGTGGAAGCCTCCAAATTTGCCAAGCATTGGGTACCCTTTTGTAAGAATTACAACATACAAGTTAGAGCACCTTTTAGATGCTTTTCTGATGTTCCCATTACCAAAAGTGACGAGTCCATGGAATTCATGCTAGAATGGTCTAGAATGAAGGATATGTATGGTCGTCTGAGCCAAAACATCAAAGATGTGAGCCAAAAACCAACTCCGTTCCCATTGGACGGAGAATTTGCAGATTTCTCAAACGCAGAGCGAAGAAACCATGCAAGCATAATTAAGATTATATTGGAGAACAAGGAAGGTCTTTCAGATGAGTTGCCACACTTAGTCTACATATCCAGAGAGAAGAGGCCACAGTATCCACATAATAACAAAGCTGGAGCTATGAATGTATTGACAAGAGTATCCGGGTTGATGACCGATGCTCCCTTTATGTTGAATGTAGACTGTGACATGTTTGTGAACAATCCAAAAATTGTTTACCACGCTATGTGCATTTTGATGGACTCAGAGATTGGTAAAGAAGTTGCTTTTGTTCAATATTTCCAGCAATTCTATGATGGTTTAAAAAATGACCCTTTTGGAAATCAGTTGGTGGCTGCATTTGAGTACATAATACGAGGCATTGCAGGACTTCAAGGACCTTACTATGTAGGAACAAACACCTTCCATAGAAGAAAGGCTATTTATGGGCTTTATCCAAATGAAATTGAAAGCAGCAAAAAAGGTCTTGCCTTAACACAACTTCACTTACTCATGTTTCTTGGTTATTTCAAAATTTCCAATGAGACTCAAAATAAAATACCATACGGATCTTCTACAGGAAAATTACCAGAGAAGATATTAATGCAACAATTTGGATGTTCAAAGGAGTTTATCAAATCAGCAACTCATGCTGTGCAGGGGAGCGCATATTATGCTAATGATATTAGTCCTTCCAAATTTATTGAGGCCGCAATCCAAGTTGCTAACTGTGGATATGAATATGGCACTAGCTGGGGTAATAAGATAGGGTGGTTATATGGATCAGTATCAGAGGATATTCCTACCGGGTTTAACATCCATAGAAAAGGTTGGAGATCAGAGTGTTGTACCCCAGATCCAATTGCCTTCACAGGGTGTGCTCCTAGAGGATTAGTCTCTACAATGATCCAACAAAAAAGATGGGCCTCAGGCGTCACTGTAAGCTTCTTTGGAAAGCACTCTCCTCTTCTGGGCTTCCTTTTTGGTAAGATCCAATTCAGGACATGCTTGTCCTACTTTTGGATTGCCAACTGGGGCATTCGTAGTGTCTTCGAAGTTTGTTATGCTGCTCTACCAGCATATTGTATAATTACCAACACCAATATCTTTCCTAAGGGACTTGGCCTATGGGCTCCTATTGCACTTTTTGTGGTTTATATGGTACATACTCTACTAGAGTATCGATCAATTGGGTTGCCCATAAGACATTGGTGGAACAACCAGAGAATGAGCATAATAAGAACCACAACTGCATGGTTTATTGGAAATTTGGATGGCATGCTCAAGGTTTTTGGGGTATCAGATGCTGTCTTTCAAGTAACACAAAAGGAAAGTTCTGATGCTGATGGAGGGGATGCAGATGATGGAAGGTTCACATTTGATGAGTCCCTAGTTTTTGTGGCAGGAACAACCATTTTACTGGTCCAATTGACAACACTAATCATCTGGATTTTTGGGTTGCAAATGCAAGCTACTAAGAGTGGAAATGGGTCTGGACCAGGGGAGTTGATTTGTGTTATGTATCTATTAGCGTGCTACTGGCAATATTTGAAAGGGTTGTTTGGCAAGGGAAAATACGGGGTTCCATCGTCCACTATATGCAAATCAGCAGTTCTTGCACTTGTCTTTGTGCACTTGTGCAGAAGCACCGCTATTGGTTGA 2268 0.4109 MDILVLLLLLMLLSVRFFSINTFTLPWFLAFLCESWFTFTWIVILNAKWSPAITITHIDRLMQRLVEVPRVDLFVTTADPILEPPIVTVNTVLSLMALDYPTNKLACYVSDDGCSPLTYYALVEASKFAKHWVPFCKNYNIQVRAPFRCFSDVPITKSDESMEFMLEWSRMKDMYGRLSQNIKDVSQKPTPFPLDGEFADFSNAERRNHASIIKIILENKEGLSDELPHLVYISREKRPQYPHNNKAGAMNVLTRVSGLMTDAPFMLNVDCDMFVNNPKIVYHAMCILMDSEIGKEVAFVQYFQQFYDGLKNDPFGNQLVAAFEYIIRGIAGLQGPYYVGTNTFHRRKAIYGLYPNEIESSKKGLALTQLHLLMFLGYFKISNETQNKIPYGSSTGKLPEKILMQQFGCSKEFIKSATHAVQGSAYYANDISPSKFIEAAIQVANCGYEYGTSWGNKIGWLYGSVSEDIPTGFNIHRKGWRSECCTPDPIAFTGCAPRGLVSTMIQQKRWASGVTVSFFGKHSPLLGFLFGKIQFRTCLSYFWIANWGIRSVFEVCYAALPAYCIITNTNIFPKGLGLWAPIALFVVYMVHTLLEYRSIGLPIRHWWNNQRMSIIRTTTAWFIGNLDGMLKVFGVSDAVFQVTQKESSDADGGDADDGRFTFDESLVFVAGTTILLVQLTTLIIWIFGLQMQATKSGNGSGPGELICVMYLLACYWQYLKGLFGKGKYGVPSSTICKSAVLALVFVHLCRSTAIG* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2033 755 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 395 754 - -
Apr2g2033 755 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 2 371 - -
Apr2g2033 755 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 200 357 IPR029044 -
Apr2g2033 755 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 2 371 - -
Apr2g2033 755 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 395 754 - -
Apr2g2033 755 SUPERFAMILY Nucleotide-diphospho-sugar transferases 86 545 IPR029044 -
Apr2g2033 755 Pfam Cellulose synthase 71 746 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2033 Apr-Chr2 25664406 25669081 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2033 20 748 Glycosyltransferase AT2G32540 44.161 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2033 - - aprc:113853590 1523.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2033 2 25664406 25669081 Apr2g2033 2 25664406 25669081 ECH
Apr2g2033 2 25664406 25669081 Apr3g1176 3 26287449 26293787 PCT