Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1940 ATGGAACCGCATGTTCTCAGTTACAACAATAATGGCAATGGCAACTGCAATGGTGACTTTGATATCATTGCTTGGTTTGAAGACTTGTCCAAGAACGCTGCTTCTGTTCAGATTCAGACATTGTGCCGGATTTTGAAGCTGAATCATGGGGTGGAATACCTGAAGAAATGGTTGGGGAGCTACAATATCCCTGAGATGGATGCATGTGCATTGGAATCTCTTTTTACTTCTGCTGTTCCCCTTGCTTCACATGCAGATTTTGAGCCATATATCGAAAAAATTGCAGATGGAGACACAGGTCCTTTACTCACGCAACAACCCATAACCACTCTTTCCTTAAGTTCTGGAACCACAGAGGGAAGGCAAAAATTCGTACCCTTTACCCGCCATAGTGCTCAAACTACCCTTCAAACTTTCACTTTAGCAGCAGCCTATAGATCAAGGGTTTATCCCACAAGGGAAGGAGGAAGGATTCTTGAATTCATATATAGTAGCAAGCAATTCAAAACAAAAGGAGGCTTAACAGTTGGAACAGCCACAACACACTACTATGCAAGTGAAGAATTCAAAACTAAACAAGAGAAAACTAAATCATTCACTTGCAGTCCCTACGAAGTTATTTCTGGTGGGGACTATGCACAATCCACGTACTGTCACCTCCTTCTAGGCCTCTTCTTCTCTGACCATGTGGAGTTTATTTCCTCAGCTTTTGTCTACGGCATAGTGCAAGCGTTTCGCAGCTTCGAAGAAATTTGGAGAGACATTTGCAATGACATTAGAGATGGTACTTTGAGTTCAAGAATCGAGTTACCCAAAATGAGAGAGGCTGTTCTGAAAATCATATCTTCAAACCCTTCTTTGGCTTCAAAATTAGAAGCAGCTTGCCAGGAGCTCGAATTGGTGGAATGGTTTGGTTTGGTTCCCAAACTTTGGCCTAATGCTAAGTTCATATATTCCATTATGACTGGTTCTATGCAACCCTATTTGAAAAAACTTAGGCATTATGCAAATGGGTTGCCACTAGTAAGTGCTGACTATGGTTCAACTGAGAGTTGGATTGGGGTTAATGTGGATCCTAGTTTGCCTCCGGAGAAAGTAACGTTTGCTGTAGTTCCCACGTTCTCTTATTTTGAGTTCATACCACTTTACAGACAGAAACAAGATTGTTGTTCAGCTGTTTCCGATGATTTCATGGAAGACAAGCCAATCCCACTATCCCAAGTTAAAGTCGGACAAGAGTACGAAATATTGCTAACAACTTTCACCGGGCTGTATAGGTGCAGACTAGGAGATGTGGTGGAAGTGGCTGGTTTTCACAATGGGACCCCAAAATTGAACTTTATATGCAGAAGAAAACTAATTCTAACTGTTAATATAGACAAGAATACAGAGAAAGACCTTCAAATAGTGGTAGAGAAAGGGTCACAGCTGCTAAACAAGGCCAAAGCTGAGCTTGTTGATTTTACTAGCCATGCAGATGTGTCAAACCAACCAGGATGCTATGTCATTTTCTGGGAGATCAAAGGAGAAGCTGAGGAGAAGGTACTTGAGGAATGCTGCAGGGAAATGGATGCAGCTTTTGTTGACCATGGCTATGTGGTAGCAAGGAAAACCAGTTCCATAGGGCCATTGAAGCTTTGCATTGTAGAGAGAGGAACTTTCAAGAAGATTTTGGATTATTTCGTAGCAAATGGTGCAGCACTGGGCCAGTTCAAGACCCCTAGGTGCACTAACAACCCGGTCCTCCTCAAAATTCTTAGTGCATGCACCATCAAAACGTTTCGCAGCACTGCTTACAGTTCAATCCAATCATGA 1815 0.4231 MEPHVLSYNNNGNGNCNGDFDIIAWFEDLSKNAASVQIQTLCRILKLNHGVEYLKKWLGSYNIPEMDACALESLFTSAVPLASHADFEPYIEKIADGDTGPLLTQQPITTLSLSSGTTEGRQKFVPFTRHSAQTTLQTFTLAAAYRSRVYPTREGGRILEFIYSSKQFKTKGGLTVGTATTHYYASEEFKTKQEKTKSFTCSPYEVISGGDYAQSTYCHLLLGLFFSDHVEFISSAFVYGIVQAFRSFEEIWRDICNDIRDGTLSSRIELPKMREAVLKIISSNPSLASKLEAACQELELVEWFGLVPKLWPNAKFIYSIMTGSMQPYLKKLRHYANGLPLVSADYGSTESWIGVNVDPSLPPEKVTFAVVPTFSYFEFIPLYRQKQDCCSAVSDDFMEDKPIPLSQVKVGQEYEILLTTFTGLYRCRLGDVVEVAGFHNGTPKLNFICRRKLILTVNIDKNTEKDLQIVVEKGSQLLNKAKAELVDFTSHADVSNQPGCYVIFWEIKGEAEEKVLEECCREMDAAFVDHGYVVARKTSSIGPLKLCIVERGTFKKILDYFVANGAALGQFKTPRCTNNPVLLKILSACTIKTFRSTAYSSIQS* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1940 604 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 18 599 IPR004993 -
Apr2g1940 604 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.10 18 599 - -
Apr2g1940 604 Pfam GH3 auxin-responsive promoter 25 579 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1940 Apr-Chr2 24852234 24855968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1940 21 597 EF-hand Containing Proteins AT1G23160 34.797 1.43e-120 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1940 K14487 - gmx:100814683 1086.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1940 2 24852234 24855968 Apr2g1940 2 24852234 24855968 ECH
Apr2g1940 2 24852234 24855968 Apr3g1079 3 25432954 25436807 PCT