Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1817 ATGGAGTCTATACTGGGTCGGGCTCTGGAGTACACTCTCAAGTACTGGCTTAAGTCCTTCTCCCGAGAACAGTTCAAGTTGCAAGGACGCACCGTTCACCTCTCCAATTTAGATATCGACGGCGACGCATTGCATTCCAGTGTTGGATTGCCGCCGGCGCTGAACGTCGCCACCGCAAAAGTTGGCAAACTCGAGATAACACTTCCGTCGGTGAGCAATGTACAAATAGAACCAATCGTTGTGGATATTGATCGACTCGATCTGGTTCTTGAAGAGAATTCCGATTTCGATGATTCTCTTAGTTCAACCAGTTCCACGCCGTCGGCTGCCTCTGCCAAGAGTAGCGGTTATGGTTTTGCTGATAAGATTGCAGATGGCATGACTATACAAATTCATACGGTTAATCTATTACTTGAAACTCGTGGTGGTTCTCGTCGCCAGGGTGGAGCAACATGGGCACCACCTATGGCATCTATCACCATTCGTAACCTTTTGCTGTATACCACAAACGAAAACTGGCAGGTTGTAAATCTTAAGGAAGCACGGGAATTCTCCAGTAACAAAAAGTACATATATGTCTTCAAAAAACTGGAATGGCAATCTTTGTCTATTGATCTTTTGCCTCATCCTGACATGTTCACGGATGCAACGTTAGGCCAGGGATCAAACCTAAGGGACGACGATGGCGCAAAGCGAGTATTCTTTGGAGGAGAACGTTTTATAGAAGGAATATCAGGAGAAGCATATATCACAGTTCAGAGAACTGAGTTGAATAGTCCACTTGGGCTTGAGGTTCAATTGCACATCAATGAGGCTGTTTGCCCTGCATTAAGTGAACCAGGACTGCGTGCACTTCTCCGCTTTATGACTGGAGTATATGTTTGTCTAAACAGGGGTGATGTTGATTTCAAGGGTCAGCAGCGATCAACTGAAGCAGCTGGGCGTTCTCTTGTCTCAATTGTCGTAGATCATATATTTCTTTGCATTAAGGATACTGAATTCCAGCTTGAGCTTTTGATGCAGTCACTCTTTTTTTCTCGGGCCAGTCTTTCTGAAGGAGATGATGATAATAACTTGACCAGGATTGCAATTGGTGGATTATTTTTGAGGGACACCTTTTGTCGCCCTCCATGTACCTTAGTGCAACCATCAATGCAACTTATCACAAGAGATGCTTTCCATTTGCCAGAATTTGCCAGAAGCTTCTGCCCACCAATATATCCTCTACAAGAACAGCAATGGCAATTGATTGAGGGAACCCCTCTAATATGCCTCCATGCTCTTAAGATCATGCCTTCTCCACTTCCACCATCCTTTGCTTCTCAAACTGTTATTGACTGTCAGCCTCTTATGATTCATCTCCAGGAAGAATCATGCCTGAGGATTTCCTCTTTATTAGCTGATGGTATAGTTGTCAATCCTGGTGACATTTTACCAGATTTCTCAGTGAAATCTTTTATTTTCAATATTAAGGGACTGGATGTTACAGTTCCTTTTGACAAGGCCAAATTGGATATTTCTAGTAGTGACGTGGACAATTCAGTCAAGACAATGTTTACTGGAGCAAGGCTTCATATTGAAAATCTTTTCTTTTTAAATTCACCCTCACTGAAACTAAGAATGCTGAACCTGGAGAAGGATCCTGCTTGCTTCTGTCTTTGGGAAGGTCAACCAGTTGATGCTAGCCAGATGAAGTGGACTGCCAGAGCATCCCAGCTTACTTTGTCTCTGGAAGCATGTTCTGACACAACTGGACATCAAAATTCCCTTGGACAGACATCAGGATTATGGAGATGTGTTGATCTGAAAGATGCTTGCATTGAAGTAGCTATGGCAACTGCTGATGGCAGTCCATTGTTAAAAGTTCCTCCTCCTGGGGGCATTGTTAGGGTTGGAGTTGCTTGCGAACAGTATATATCCAACACTTCTGTTGAACAGTTATTTTTTGTCCTGGATCTGTATGGTTATTTTGGGACAGTTAGTGAAAAAATAGCAATGGCTGGAAAAAGGAAACAATTGGAGGACATTAGGGACAAATCTTTTAGTGGAAAGCTAATGGACAACGTTCCTAGTGACACTGCTGTGATTTTAGCAGTGAAAAACCTCCAACTTCGATTTCTGGAATCATCTTTTATGAATGTTGAAGGGATGCCTTTAGTGCAATTTGTTGGAAATGATCTGTTCACTAGTGCCACTCATAGAACTCTTGGTGGGGCTATTGTTGTTTCATCTATTTTACGTTGGGAGAGTGTTGAGATAGGTTGTGTGGATGCTGAGGGGCACTTGGCATGTGAAAGTGGCTCATTCTTGAGTTCTAGTGAAAATGCTCCCTCATTGAGTGATAATGGATATCCTCACCTAAGAGCTGTTTTCTGGGTGCATAAGAACGAGAAGCATCTATTGAATGGAAATGCTCATTCAGTCCCTTTTCTCGACATAAGCATGGTGCATGTCATACCATTATGTGAACAAGACTTGGAGTCTCATAGTTTGAATGTCTCAGCTACTGTATCAGGTGTTCGTCTTGGTGGAGGAATGAACTATACTGAAGCTCTCCTGCATAGATTTGGGATACTTGGGCCTGATGGAGCTCCTGGGACAGGTCTTTGTAAAGGGTTGGAAAACCTACAAAAAGGACCATTGTCAAAACTTTTTAAGACAACTTCTCTAATTAATGATTCAGAAGATGCTGGAAGTACGAGAGAAGGGAAAGAAACTGGTTTTCCACACTTGAAAAAGCCTGATGATGTGGATGTAACTATAGAATTGAGAGACTGGTTATTTTCTCTTGAAGATGCACAAGGGACAGCTGAAAGATGGTGGTTCTCCAACCATGAAGATGAAGGCAGAGAAGAGAGGAGTTGGCATGCATCTTTTCATGGTTTGCGAGTTAATGCAAAAAGTAGCCCAAAGAATGTTCCAGATGGAAAAGCACAATTGCAAAGAATACAACAACATCCAGTAGAACTGATTACGATTGGAGTTCAGGGACTGCAAATCTTGAAGCCTCATACTCAAAAAGACATCCCTTCATCAATGCTAATTGCAAATGGGGTTAAAAAGTGCACTGACACAGTTGGTGGAATTGGTCTTGAAGTTCGCTTGATATTAGGTGGGGAAAATGCTGATGATGAAATGGCTAATTGGGAAGTGGAAAAACTAAAATTCTCTGTTAAGCAACCGATTGAAGCAGTTGTAACCAAGGATGAGCTTCAGCATCTCACTTTTCTGTGCAAATCTGAAATTGATTCAATTGGCCGGATAACTGCTGGAATTATACGGTTGCTTAAGTTAGAAGGTTCTGTTGGTCAGTCTGTAATAGATCAACTCAGCCACCTAGGAAGCGAAGGCATTGACAAGATTTTCTCTTCTGAAAAGGTTAGTAGAGAGGGAAGTGTTGGTAGTAGGGGGCTATCCCCATCACCAAACCTCATAAACGAGGAAACACACAGAACTACGGAACAAACATTAACTTTGCTTGAGGAAGCGCTTGTGGATTCACAGGCTAAGCTTGATGATTTGATCAGTGATATTGGTACTTCCGAGTCTTCCTCCTTTCAACACCATACCATCGTCAAACTGAGTCAAAAGATAGAGAGTATGCAGGGCTTATTGATGCAATTACGGAATCAACTTTAA 3639 0.424 MESILGRALEYTLKYWLKSFSREQFKLQGRTVHLSNLDIDGDALHSSVGLPPALNVATAKVGKLEITLPSVSNVQIEPIVVDIDRLDLVLEENSDFDDSLSSTSSTPSAASAKSSGYGFADKIADGMTIQIHTVNLLLETRGGSRRQGGATWAPPMASITIRNLLLYTTNENWQVVNLKEAREFSSNKKYIYVFKKLEWQSLSIDLLPHPDMFTDATLGQGSNLRDDDGAKRVFFGGERFIEGISGEAYITVQRTELNSPLGLEVQLHINEAVCPALSEPGLRALLRFMTGVYVCLNRGDVDFKGQQRSTEAAGRSLVSIVVDHIFLCIKDTEFQLELLMQSLFFSRASLSEGDDDNNLTRIAIGGLFLRDTFCRPPCTLVQPSMQLITRDAFHLPEFARSFCPPIYPLQEQQWQLIEGTPLICLHALKIMPSPLPPSFASQTVIDCQPLMIHLQEESCLRISSLLADGIVVNPGDILPDFSVKSFIFNIKGLDVTVPFDKAKLDISSSDVDNSVKTMFTGARLHIENLFFLNSPSLKLRMLNLEKDPACFCLWEGQPVDASQMKWTARASQLTLSLEACSDTTGHQNSLGQTSGLWRCVDLKDACIEVAMATADGSPLLKVPPPGGIVRVGVACEQYISNTSVEQLFFVLDLYGYFGTVSEKIAMAGKRKQLEDIRDKSFSGKLMDNVPSDTAVILAVKNLQLRFLESSFMNVEGMPLVQFVGNDLFTSATHRTLGGAIVVSSILRWESVEIGCVDAEGHLACESGSFLSSSENAPSLSDNGYPHLRAVFWVHKNEKHLLNGNAHSVPFLDISMVHVIPLCEQDLESHSLNVSATVSGVRLGGGMNYTEALLHRFGILGPDGAPGTGLCKGLENLQKGPLSKLFKTTSLINDSEDAGSTREGKETGFPHLKKPDDVDVTIELRDWLFSLEDAQGTAERWWFSNHEDEGREERSWHASFHGLRVNAKSSPKNVPDGKAQLQRIQQHPVELITIGVQGLQILKPHTQKDIPSSMLIANGVKKCTDTVGGIGLEVRLILGGENADDEMANWEVEKLKFSVKQPIEAVVTKDELQHLTFLCKSEIDSIGRITAGIIRLLKLEGSVGQSVIDQLSHLGSEGIDKIFSSEKVSREGSVGSRGLSPSPNLINEETHRTTEQTLTLLEEALVDSQAKLDDLISDIGTSESSSFQHHTIVKLSQKIESMQGLLMQLRNQL* 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1817 1212 Coils Coil 1157 1177 - -
Apr2g1817 1212 Coils Coil 1191 1211 - -
Apr2g1817 1212 PANTHER AMINO-TERMINAL REGION OF CHOREIN, A TM VESICLE-MEDIATED SORTER 1 1211 - -
Apr2g1817 1212 Pfam N-terminal region of Chorein or VPS13 1 99 IPR026854 -
Apr2g1817 1212 PANTHER UNCHARACTERIZED 1 1211 IPR026728 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1817 Apr-Chr2 23781420 23790257 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1817 - - gmx:100803142 2098.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1817 2 23781420 23790257 Apr5g0001 5 17 10187 PCT