Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1702 ATGCCTCCTTCTTACTTCCCTCTTCGTTGGGAGAGCACAGGGGATCAGTGGTGGTATGCATCTCCTATTGATTGGGCTGCAGCAAATGGACTATATGATCTTGTCATTGAGCTTCTTCACCTTGACACAAACCTTCTCATTAAGCTCACTTCCCTTCGTAGGATTCATCGCCTTGAAACTGTTTGGGATGATGAGGCTCAGTTTGAGGATGTTGCCAAGTGTCGTTCCATGGTTGCAAGGAATCTTCTGCATGAGTGTGAGAGAGGAAGTGGGAACAACTCTCTCATTGGTGCAGGGTATGGTGGCTGGCTTCTCTACACTGCTGCTTCAGCTGGTGATGTGGACTTTGTTAATGAATTGTTGGGGAGAGACCCCTTGTTGGTGTTTGGTGAAGGAGAGTATGGTGTCACTGATATGCTCTATGCTGCTGCTAGGAGCAAGAAGTCTGAGGTGTTTAAGATTCTGTTTGATTCTGCCCTCTCAAGAAAGGAGTGCCTTGGTGGTAGCAATGAAGCAGAATTGGAGGAAGGGGAGTTAGATGGAGGTGCTTGGGTTTTCAAAAGGGACATGATGAATAGGGCCATTCATGCTGCTGCTAGAGGAGGGAATTGGGAAATATTGAAGCAGATTCTAGCAAGTGTTTCTCATATTGTGTCATACAGAGATGCTCAAGGATGTACAGTCCTGCATGCAGCAGCTGGAAAAGGGCAGGTTGAGGTGGTGAGAAATCTAATTGTGTCATGTGATATCATAGATTCAACTGATGCTCAGGGCAATACAGCATTACACGTGGCTTCTTACAGAGGTTACTCACCTGTGGTAGAGGTTCTGATTGAAGCATCTTCCTCATTAACAATGTTAACCAATCACTATGGAGATACTTTTCTTCACATGGCAGTGGTTGGTTTTAGAAGCCCCGGTTTCTGTAGACTGGACAAGCACACTGAGCTCATGAAGCAATTGACATGTGAAAAGATTGTAAACATGCAAGACATCATCAATGTCAGGAACAATGATGGAAAAACAGCTCTTCATGTTGCTATTATTCATAACATTCAATGTGATGTAGTGGAACTATTGATGTCTGTTCCATCAATTGATTTGAACGTTCGTGATGCTGATGGAATGACCCCTTTGGATCATCTAAAGCAAAGACCAGTATCAGCATCTTCTGAAATTTTAATCAAGCAGTTGATTTCAGCTGGAGGGATCTCTAATTGTCAAGATTCCATCGCAAGAAATGCTCTTGTTACTCATCTGAAAACTCATGACATTGGAGCGAGTCCTGGAACATCATTTAGAATATCAGATTCTGAGATATTGTTGTACACAGGCATTGAAAATTCATCTGATGCCAATTATGATCAGGCAAGTGTAGAATCAAATTCATGGGCAAGTGAAATAAACAATCATGATTCAGCCAATTCCCAAAGTAACAGTAAGTCTAGTTCTTTCAATTATGCTGCAAGGCGATTAAAGCTTCTACTTCAGTGGCCTAGTAGAAGAGACACAAAAGAAACAGCCTCAGAATTGGAAGATGATGCTTCTGTGAATTCTTTCAGTTCAAGGAAAAACTTCGATGACTTTCCAATCCCGTTAAGGCAAAGATACTCTGAAATGTGTTGTCTTCCAAACAACAAAAGAACACTATCTATAAGGACTTATGCTCCAAGCCCATTAGCCAAAAAGTATTTTACCGCAGGCCTAATGCAAGGTGTGATTAAGGTAAAGCCACATGTGCCTCTTCCTACTCATTCAACTTCTAGTTCTTCTCAAGTGTTCTCTATCTCTTCTCATTCTTCAAATAATAAACCAAAACGTGTTGATACAATGGGACCCTCTTGCTCCAATCGACCAATTGATGATGGTGGCACCATACAGTTGAACTACAAGCAAAGCTCTTTCAATAAGAAATTGATGAACCGATATTTTTCTTTTGGAGCACAAGGCCAGGCTTTGGAAGATGCAAATAGCTGCACAATGTCAAATCCAAGCTCTAAGCGTTTTAGTTCTTTAGTTGCATAG 2025 0.4173 MPPSYFPLRWESTGDQWWYASPIDWAAANGLYDLVIELLHLDTNLLIKLTSLRRIHRLETVWDDEAQFEDVAKCRSMVARNLLHECERGSGNNSLIGAGYGGWLLYTAASAGDVDFVNELLGRDPLLVFGEGEYGVTDMLYAAARSKKSEVFKILFDSALSRKECLGGSNEAELEEGELDGGAWVFKRDMMNRAIHAAARGGNWEILKQILASVSHIVSYRDAQGCTVLHAAAGKGQVEVVRNLIVSCDIIDSTDAQGNTALHVASYRGYSPVVEVLIEASSSLTMLTNHYGDTFLHMAVVGFRSPGFCRLDKHTELMKQLTCEKIVNMQDIINVRNNDGKTALHVAIIHNIQCDVVELLMSVPSIDLNVRDADGMTPLDHLKQRPVSASSEILIKQLISAGGISNCQDSIARNALVTHLKTHDIGASPGTSFRISDSEILLYTGIENSSDANYDQASVESNSWASEINNHDSANSQSNSKSSSFNYAARRLKLLLQWPSRRDTKETASELEDDASVNSFSSRKNFDDFPIPLRQRYSEMCCLPNNKRTLSIRTYAPSPLAKKYFTAGLMQGVIKVKPHVPLPTHSTSSSSQVFSISSHSSNNKPKRVDTMGPSCSNRPIDDGGTIQLNYKQSSFNKKLMNRYFSFGAQGQALEDANSCTMSNPSSKRFSSLVA* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1702 674 ProSiteProfiles Ankyrin repeat region circular profile. 257 284 - -
Apr2g1702 674 Gene3D - 72 427 IPR036770 -
Apr2g1702 674 ProSiteProfiles Ankyrin repeat region circular profile. 224 245 - -
Apr2g1702 674 ProSiteProfiles Ankyrin repeat profile. 224 256 IPR002110 GO:0005515
Apr2g1702 674 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 1 669 - -
Apr2g1702 674 SUPERFAMILY Ankyrin repeat 104 395 IPR036770 -
Apr2g1702 674 MobiDBLite consensus disorder prediction 584 610 - -
Apr2g1702 674 SMART ANK_2a 100 129 IPR002110 GO:0005515
Apr2g1702 674 SMART ANK_2a 374 407 IPR002110 GO:0005515
Apr2g1702 674 SMART ANK_2a 257 286 IPR002110 GO:0005515
Apr2g1702 674 SMART ANK_2a 291 331 IPR002110 GO:0005515
Apr2g1702 674 SMART ANK_2a 224 253 IPR002110 GO:0005515
Apr2g1702 674 SMART ANK_2a 134 164 IPR002110 GO:0005515
Apr2g1702 674 SMART ANK_2a 339 370 IPR002110 GO:0005515
Apr2g1702 674 SMART ANK_2a 18 47 IPR002110 GO:0005515
Apr2g1702 674 SMART ANK_2a 190 219 IPR002110 GO:0005515
Apr2g1702 674 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 1 669 - -
Apr2g1702 674 Pfam Ankyrin repeat 339 372 IPR002110 GO:0005515
Apr2g1702 674 Pfam Ankyrin repeats (3 copies) 195 284 IPR002110 GO:0005515
Apr2g1702 674 MobiDBLite consensus disorder prediction 584 619 - -
Apr2g1702 674 ProSiteProfiles Ankyrin repeat profile. 257 289 IPR002110 GO:0005515
Apr2g1702 674 MobiDBLite consensus disorder prediction 655 674 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1702 Apr-Chr2 22655190 22658759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1702 104 380 Miscellaneous Gene Families AT1G07710 27.018 6.00e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1702 - - gmx:100791999 1065.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2278 10 34924107 34926826 Apr2g1702 2 22655190 22658759 PCT