Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2278 ATGGCTCCTTCGTGCTTTCCACTTCGTTGGGAGAGCACAGGGGAACAATGGTGGTATGCATCACCTATTGACTGGGCCTCTGCAAATGGGTACTACGATCTGGTGGTGGAGCTTCTTCACCTTGACACCAATCTACTAATTAAGCTAACTTCCCTTCGAAGAATTCGGCGCCTCGAAACCGTGTGGGATGACGTGGCACAGTTCGGAGAGGTCGCGAAATGTCGGTCGCAGGTTGCAAGGAATCTGATGATGGAGTGCGAGACAGGACCAGGACACAACTCTCTCATTCGAGCTGGCTATGGTGGGTGGCTTCTCTACACTGCTGCTTCAGCTGGTGACGTGGATTTTGTGCGAGAATTGTTGGGGAGATACCCTTCATTGGTGTTTGGAGAAGGGGAGTATGGAGTTACTGATATACTTTATGCTGCTGCAAGGAGCCATAGTTGTGAGGTGTTTAAGGTTTTGCTTGATTCTGCTTTGTCTCCGAGAGAGTGCGAGAGTGGTGGAGCACAAGTAGAAGAGGTTTTCAAGAGGGATATGGTGAATAGGGCCATTCATGCTGCTGCTAGAGGAGGGAACTGGGAGATGCTGAAGCAGCTTGTTGGAAGTGCTTCTGGCGTTTTGGGCTATAGAGATGCTCAAGGATTCACTGTTTTGCATACAGCTGCTGGCAGAGGTCAGGTTCAGGTGGTGAGAAATCTACTTGCATCAGTTGATATAATAAACTTGACAGATGCTCAAGGGAACACGGCACTACATGTAGCTTCTTACAGGGGTCACTTACCCGTGGTAGATATTCTGGTTCTTGCATCTCCTTCGGTAGCACTGTTGACAAATCACTATGGAGATACTTTTCTTCATATGGCAGTGGCTGGTTTCAGAAGTCCTGGTTTCAGTAGACTGGACAAGCACACTGAGCTCATGAAGCAATTGGTAAGTGGAAAGATTGTGAACATGCAGAACATAATCAATGTCAAGAACAATGATGGAAGAACAGCTCTTCATGTGTCTCTGATTGACAATATTCAATTTGAGCTTGTGGAAATGTTGATGTCTGTGCCGTCAATTGATTTGAACATTTGTGATGCTGAAGGGATGACCCCTTTGGATATTTTGAAGCAAAGACCAAAATCAGCATCTTCTGATATTTTAATCAAACGTATGATTTCGGCTGGAGGGATCTCTAATTGTAAAGATGCTATGACAGGAAATACCCTTTTCACTCATCACAAAACTAATGTCATTGGAGGTAGTCCTGGGACTTCATTTAGAATACCAGATGCAGAGATATTCTTGTACACTGGCATTGAGAATTCATCAGATGCAAACTATGATCAAGCAAGTGTGGAATCATATTCATGCTCAAATGAACTAGGCAATTTTGATTCCGCCAATTCCCCATGTAACAAGAAGTCTAATCCTGTCAATCATGCTACAAGCCGCTTAAAGTTTCTTCTCAGGTGGCCTAGGAGAAGAGAGACAAAAGCAGCTACCTCAGAATTGGAAGATGATGATTGTGTTGATCCTTTGAGTTCAAGTACCAACTATGAAGAATTTCCAATCTCATTACGGGAAAGATACTCACAATCATGCTCCCTTCCAAACAACAAAAGAACACAATCTATGAGAACTTCTCTTCCAAGTCCATCCTCCAAGATGAAATTCACCACAGGCCTAATGCATGGTGTTATTCAGCTAAAACCACAATTTGCACATTCAAGTCCTAGTCCTTTTCAAGATTTATCTGTGGCTTCTCTATCTTCCATAAATAAACAAAAGGGTGTTGATGTAATGGGACCCTCTTGCTCCAATAGATCAATAGATGATGGCACACTTCTATTGAACTACAAACAGTGCTCCTTCAATAAGAAATTGATGAATCGGTATTTTTCTTTTGGAGCACAAGGCTTGGCTGTTGAAGATTCAAATAGTTGCACAAAATCAAATGGGAGTTACAAGCGTTTCGGTTCTTTAGTTGCCTAA 1983 0.4317 MAPSCFPLRWESTGEQWWYASPIDWASANGYYDLVVELLHLDTNLLIKLTSLRRIRRLETVWDDVAQFGEVAKCRSQVARNLMMECETGPGHNSLIRAGYGGWLLYTAASAGDVDFVRELLGRYPSLVFGEGEYGVTDILYAAARSHSCEVFKVLLDSALSPRECESGGAQVEEVFKRDMVNRAIHAAARGGNWEMLKQLVGSASGVLGYRDAQGFTVLHTAAGRGQVQVVRNLLASVDIINLTDAQGNTALHVASYRGHLPVVDILVLASPSVALLTNHYGDTFLHMAVAGFRSPGFSRLDKHTELMKQLVSGKIVNMQNIINVKNNDGRTALHVSLIDNIQFELVEMLMSVPSIDLNICDAEGMTPLDILKQRPKSASSDILIKRMISAGGISNCKDAMTGNTLFTHHKTNVIGGSPGTSFRIPDAEIFLYTGIENSSDANYDQASVESYSCSNELGNFDSANSPCNKKSNPVNHATSRLKFLLRWPRRRETKAATSELEDDDCVDPLSSSTNYEEFPISLRERYSQSCSLPNNKRTQSMRTSLPSPSSKMKFTTGLMHGVIQLKPQFAHSSPSPFQDLSVASLSSINKQKGVDVMGPSCSNRSIDDGTLLLNYKQCSFNKKLMNRYFSFGAQGLAVEDSNSCTKSNGSYKRFGSLVA* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2278 660 SMART ANK_2a 100 129 IPR002110 GO:0005515
Apr10g2278 660 SMART ANK_2a 214 243 IPR002110 GO:0005515
Apr10g2278 660 SMART ANK_2a 18 47 IPR002110 GO:0005515
Apr10g2278 660 SMART ANK_2a 134 164 IPR002110 GO:0005515
Apr10g2278 660 SMART ANK_2a 247 276 IPR002110 GO:0005515
Apr10g2278 660 SMART ANK_2a 329 360 IPR002110 GO:0005515
Apr10g2278 660 SMART ANK_2a 281 321 IPR002110 GO:0005515
Apr10g2278 660 SMART ANK_2a 180 210 IPR002110 GO:0005515
Apr10g2278 660 ProSiteProfiles Ankyrin repeat profile. 247 279 IPR002110 GO:0005515
Apr10g2278 660 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 1 655 - -
Apr10g2278 660 Gene3D - 11 409 IPR036770 -
Apr10g2278 660 ProSiteProfiles Ankyrin repeat region circular profile. 214 235 - -
Apr10g2278 660 Pfam Ankyrin repeats (3 copies) 185 268 IPR002110 GO:0005515
Apr10g2278 660 ProSiteProfiles Ankyrin repeat region circular profile. 247 268 - -
Apr10g2278 660 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 1 655 - -
Apr10g2278 660 ProSiteProfiles Ankyrin repeat profile. 214 246 IPR002110 GO:0005515
Apr10g2278 660 SUPERFAMILY Ankyrin repeat 104 384 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2278 Apr-Chr10 34924107 34926826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2278 105 371 Miscellaneous Gene Families AT2G31820 30.403 1.23e-21 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2278 - - gmx:100782564 1059.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2278 10 34924107 34926826 Apr2g1702 2 22655190 22658759 PCT