Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1687 ATGAAAATGCCTAGTCTTGTAGCTGAAAAGAAGAGATTTACAGAGGCAAATATGTATTTTTCCAATTCGGTCAATCTTGATAAACCAGCGCTTATAAAAAGCAATTATTGTGTGAGGTCTGAGGCTATGGATGATGATGGTAGTAGTCCTATCCTACCTGGCCTGCCTGATGATGTTGCAAAGCACTGCCTTGCACTTGTGCCTCGTTCTAACACCCCAGTTATGGGTGGTGTATGCAAGAAATGGCGGAGTTTTGTTCGAAGCAAAGAATTTATAATGGTGCGAAAATTGGCTGGGATGCTTGAGGAATGGCTCTATATCTTAACAGCAGGTAGTAAAGGAAAAGGAAGCCACTGGGAGGTCATGGATTGTCAGGGTCATAATCGCCGGTCTCTTCCACCAATGCCTGGTCCAGCGAAGGCTAAGTTTGGTGTAGTGGTTCTTAATGGAAAGCTCCTGGTTATGGCTGGTTGTTCATCAATTGATGGAACTGCCGCTGTCTCAGCAGAGGTTTACCAATATGATTCTTGCCTCAACAGCTGGAGCAGATTGTCAAACATGAACGTGGCTCGTTATGACTTTGCTTGTGCTGAAGTCAATGGTTTGGTTTATGCTGTTGGAGGCTACGGTGCAGAAGGTGACAATCTCTCCAGTGCTGAGGTATATGACCCAGATACTGATCAGTGGACACTGATAGAGAGCCTTCGTCGCCCAAGATGGGGTTGCTTTGCCTGTGGATTTGAGGGGAAACTCTATGTAATGGGTGGAAGGTCAAGCTCTACAATTGGAAATTATAAGTTTGTTGATGTCTACAACCCTGGGAGGCATGGGTGGTGTGAGATGAAAAATGGCTGTGTAATGGTCACTGCTCATGCAGTGGTGGGAACGAAGTTGTTCTGCATGGAGTGGAAGAATCAGAGGAAGTTAGCAATATTCAATCCAGAGGACAATTCATGGATAAAGGTACCAGTCCCTTTGACAGGGAGTTCAAGCATTGGTTTTCGGTTTGGGATATTGGATGGTAAGCTGTTGCTATTCTCACTGGAGGAAGAACCTTCATACAAGACTTTGTTGTATGATCCAAATGCAGCCCTGGGTTCTGAGTGGCAGACATCTGATATTAGACCATCTGGTTTGTGCTTATGCAGTGTAACTATTAAGGCCTGA 1167 0.449 MKMPSLVAEKKRFTEANMYFSNSVNLDKPALIKSNYCVRSEAMDDDGSSPILPGLPDDVAKHCLALVPRSNTPVMGGVCKKWRSFVRSKEFIMVRKLAGMLEEWLYILTAGSKGKGSHWEVMDCQGHNRRSLPPMPGPAKAKFGVVVLNGKLLVMAGCSSIDGTAAVSAEVYQYDSCLNSWSRLSNMNVARYDFACAEVNGLVYAVGGYGAEGDNLSSAEVYDPDTDQWTLIESLRRPRWGCFACGFEGKLYVMGGRSSSTIGNYKFVDVYNPGRHGWCEMKNGCVMVTAHAVVGTKLFCMEWKNQRKLAIFNPEDNSWIKVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYKTLLYDPNAALGSEWQTSDIRPSGLCLCSVTIKA* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1687 388 Pfam Kelch motif 239 283 IPR011498 GO:0005515
Apr2g1687 388 Gene3D - 89 386 IPR015915 GO:0005515
Apr2g1687 388 SMART kelc_smart 151 201 IPR006652 GO:0005515
Apr2g1687 388 SMART kelc_smart 250 298 IPR006652 GO:0005515
Apr2g1687 388 SMART kelc_smart 202 249 IPR006652 GO:0005515
Apr2g1687 388 SUPERFAMILY Kelch motif 102 349 IPR015915 GO:0005515
Apr2g1687 388 Pfam F-box domain 54 90 IPR001810 GO:0005515
Apr2g1687 388 Pfam Kelch motif 143 188 IPR006652 GO:0005515
Apr2g1687 388 Pfam Kelch motif 190 235 IPR006652 GO:0005515
Apr2g1687 388 PANTHER OS02G0202900 PROTEIN 3 388 IPR045887 -
Apr2g1687 388 PANTHER KELCH REPEAT F-BOX PROTEIN 3 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1687 Apr-Chr2 22524316 22528271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1687 55 233 Miscellaneous Gene Families AT4G33900 29.949 6.79e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1687 - - gmx:100815474 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2294 10 35016658 35020291 Apr2g1687 2 22524316 22528271 PCT