Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2294 ATGCCTGGTTTTGCTGTTGGAAAGAAGAGATTTACAGAGTCGAATATGTGTTTCACTGATTTGATCAATCGAGATAAATCAACTCTGTCTCAAAGCAATCATTGTTTAACCCCTGAGGCACTGAATAAAGTTGATAGCCCCATTGTACCTGGGCTGCCTGATGATGTGGCAAAGTATTGTCTTGCACTTGTGCCTCGTTCCAACTTCCCAGCTATGGGGGGTGTCTGTAAGAGATGGAGATCGTTTATTCAAAGCAAAGAATTTGCTACTGTGCGAAAATTGGCTGGGATGCTTGAAGAATGGCTCTATTTCTTAACAATGGACAGTGAAGGAAAGGAAAGTCATTGGGAGGTTGTTGATTTTCTCGGTCATAAATGCCGATCTCTACCACCAATGCCTGGTCCAGCAAAGGCTGGATTCGGAGTAGTGGTTCTTAATGGAAAGTTTCTTGTTATGGCCGGTTATTCAACTATTGAAGGAACTACCTTTGCCTCAGCAGATGTTTACCAATATGATTCTTGCCTCAACAGTTGGAGCAGATTGTGTGACATGAATGTGGCTCGTTATGACTTTGCTTGTGCTGAAGTCAATGGATTGGTTTATGCTGTTGGAGGCTATGGAGTGAATGGTGACAGTCTCTCCAGTGCTGAGGTATATGATCCAGATACTGACAAGTGGACACTGATAGAAAGCCTTCGCCGCCCAAGATGGGGTTGTTTCGCTTGTGGATTTGAGGGTAAGCTCTATGTGATGGGTGGAAGGTCAAACTTTACTATTGGAAATTCCAAGTTTGTGGACATATATAACCCCGAGAGGCACAGCTGGTGTGAGATTAAGAAGGGCTGTGTTATGGTCACAGCTCATGCAGTATTAGGAAATAAGTTGTTTTGCATAGAGTGGAAGAATCAGCGGAAGCTTTCAATATTCAGTCCTGAGGACAATTCATGGGAAATGGTACCAGTCCCATTGACAGGGAGCTCAAGTATTGGTTTTCGATTTGGGATACTGGATGGAAAGCTTTTGCTTTTCCCACTGGAGGCAGAACCTGCTTATCAAACATTGTTATATGATCCAAATGCTGCTCTTGGGTCAGAGTGGCAGACTTCTGATATAAGGCCATCTGGTTTGTGCTTGTGCACTGTAACAATCAAGGCATGA 1158 0.4361 MPGFAVGKKRFTESNMCFTDLINRDKSTLSQSNHCLTPEALNKVDSPIVPGLPDDVAKYCLALVPRSNFPAMGGVCKRWRSFIQSKEFATVRKLAGMLEEWLYFLTMDSEGKESHWEVVDFLGHKCRSLPPMPGPAKAGFGVVVLNGKFLVMAGYSTIEGTTFASADVYQYDSCLNSWSRLCDMNVARYDFACAEVNGLVYAVGGYGVNGDSLSSAEVYDPDTDKWTLIESLRRPRWGCFACGFEGKLYVMGGRSNFTIGNSKFVDIYNPERHSWCEIKKGCVMVTAHAVLGNKLFCIEWKNQRKLSIFSPEDNSWEMVPVPLTGSSSIGFRFGILDGKLLLFPLEAEPAYQTLLYDPNAALGSEWQTSDIRPSGLCLCTVTIKA* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2294 385 Gene3D - 86 382 IPR015915 GO:0005515
Apr10g2294 385 SMART kelc_smart 247 295 IPR006652 GO:0005515
Apr10g2294 385 SMART kelc_smart 199 246 IPR006652 GO:0005515
Apr10g2294 385 SMART kelc_smart 148 198 IPR006652 GO:0005515
Apr10g2294 385 Pfam F-box domain 52 88 IPR001810 GO:0005515
Apr10g2294 385 PANTHER OS02G0202900 PROTEIN 1 385 IPR045887 -
Apr10g2294 385 Pfam Kelch motif 187 232 IPR006652 GO:0005515
Apr10g2294 385 Pfam Kelch motif 138 184 IPR006652 GO:0005515
Apr10g2294 385 SUPERFAMILY Kelch motif 99 343 IPR015915 GO:0005515
Apr10g2294 385 Pfam Kelch motif 236 279 IPR011498 GO:0005515
Apr10g2294 385 PANTHER KELCH REPEAT F-BOX PROTEIN 1 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2294 Apr-Chr10 35016658 35020291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2294 52 230 Miscellaneous Gene Families AT4G33900 28.351 6.23e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2294 - - gmx:100802912 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2294 10 35016658 35020291 Apr2g1687 2 22524316 22528271 PCT