Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1676 ATGAGAACAAGGAGAGGGGCGTCTTATTCTGGACCTGGATTAGTAACAAGGATGTGTTCAGATGTTAAACAGGATCTGCACATGCATATGCATATGCATGTGCCTCGAGACTCTATTTATAGCCGGAAACGGCAGAAGAAAACACCGCAGAAAACCCCCGCCGATTACGATTTTTTTGAGTCTTTGCCGGATGACCTTGTAATTTCTATCTTCTGTAAACTCAGTTCCACCGCCACTTCCCCTTCTGATTTTGTCAACGTTTTAATAACGTGCAAAAGATTAAACAGATTAGCGCTTCATCCTCTTGTGTTATCCAAAGCCTCGCCGAGAATTTTCTCTGTTAAAGCCAAAGATTGGTGCGATTCTGCACATCGCTTCCTCAAACATTGTGCCGATGCAGGGAACGTTGAGGCCTGCTACACTTTGGGCATGATTCGCTTCTACTGTTTGCAGAACAGAGGAAGCGGCGCGTCACTGATGGCCAAGGCGGCGATTAATTCTCACGCGAGGGCTCTGTACTCACTTGCGGTGATTCAGTTCAACGGCAGCGGCGGAACCAAGAGCGATAAGGATTTACGCGCTGGCGTGGCTCTTTGTGCCAGAGCGGCATTCCTCGGCCACGTCGACGCGTTGCGAGAGCTCGGTCACTGCTTGCAAGACGGTTATGGCGTCCGGCAGAACATCGCCGAGGGACGGCGATTTCTCGTCCAGGCTAACGCTAGGGAACTCGCTGCTGTGCTTTCCATCGGCGCCGCTGCGCGACACTGGCTGACGTGGAACCTGCAGCCGCAGCTCCGGCAAGGGTCCGGGTGTCCGTTGCTGAGCGATTTCGGGTGCAACGTGCCGGCGCCGGAGGTTCATCCGTCGAGCCGGTTCATGGCGGAGTGGTTCGCGATTCGTGGCGGTTCGCCCGGACCGGGTTTGAGGCTTTGCTCGCATGCGGGTTGTGGTCGGCCAGAGACGCGGAAGCACGAGTTCCGAAGGTGCTCGGTGTGTGGCGCGGTGAATTATTGCTCACGCGCTTGCCAGGCGCTTGATTGGAAGTTGCGTCACAAGGCGGAGTGCGCCCCCGTGGAACGGTGGCTCGATGAAGAAGGTGAGGATGTCGGGGACGACGACGGTGACGGCGAGGGGGTGGTTATGGTGGATAGTTAG 1155 0.555 MRTRRGASYSGPGLVTRMCSDVKQDLHMHMHMHVPRDSIYSRKRQKKTPQKTPADYDFFESLPDDLVISIFCKLSSTATSPSDFVNVLITCKRLNRLALHPLVLSKASPRIFSVKAKDWCDSAHRFLKHCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAINSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNIAEGRRFLVQANARELAAVLSIGAAARHWLTWNLQPQLRQGSGCPLLSDFGCNVPAPEVHPSSRFMAEWFAIRGGSPGPGLRLCSHAGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKLRHKAECAPVERWLDEEGEDVGDDDGDGEGVVMVDS* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1676 384 ProSiteProfiles Zinc finger MYND-type profile. 313 355 IPR002893 -
Apr2g1676 384 MobiDBLite consensus disorder prediction 365 384 - -
Apr2g1676 384 Gene3D - 307 359 - -
Apr2g1676 384 SUPERFAMILY F-box domain 46 118 IPR036047 GO:0005515
Apr2g1676 384 SUPERFAMILY HCP-like 120 238 - -
Apr2g1676 384 SUPERFAMILY HIT/MYND zinc finger-like 310 360 - -
Apr2g1676 384 Pfam MYND finger 315 355 IPR002893 -
Apr2g1676 384 PANTHER MYND DOMAIN-CONTAINING 39 384 IPR044508 -
Apr2g1676 384 Gene3D Tetratricopeptide repeat domain 106 258 IPR011990 GO:0005515
Apr2g1676 384 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 39 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1676 Apr-Chr2 22421865 22423690 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1676 - - gmx:100798174 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2306 10 35082081 35083984 Apr2g1676 2 22421865 22423690 PCT