Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2306 ATGAGAACTAGAAGAGGCTTTTCTTATCCTCCAATTCCAACCATGTTTTCCGACACTGTTAGCCGGAAAAGACAGAAGAAATCGCCGGACACAACCGCTGGTAACTCTGACTTTTTCGAGTCTTTGCCTGATGACCTTGTCCTCTCTATTCTCTGCAAACTTAGCTCCACAGCGTCTTCCCCTTCCGATTTTGTTAGTGTTTTGATCACGTGCAAGAGACTAAACTCTTTAGCTCTTCACTCTCTGGTATTGTCGAAAGCATCCCATAAAACATTCTCAGTTAAAGCTAAAAACTGGTGTGACTCCGCACATCGTTTTCTCAAACACTGTGCCGATGCCGGAAACATTGAGGCGTGTTACACTCTTGGCATGATTCGGTTCTACTGTTTGCAAAACAGAGGTAGCGGAGCCTCGCTTATGGCTAAGGCAGCGATGCACTCTCACGCGCCGGCTCTCTACTCGCTGGCCGTTATTCAGTTTAACGGCAGCGGCGGCACCAAAAACGACAAAGACCTTCGAGCTGGAGTTGCGCTTTGCGCACGCGCTGCTTTCCTCGGTCACATCGACGCGCTGCGTGAACTTGGCCATTGCTTGCAAGATGGTTACGGAGTTAAGCAGAACGTAACGGAAGGACGACGGTTTCTGGTCCAAGCCAATGCGCGTGAACTTGCAGCCTCACTTGCCGGGTCGGGTTGCCCGTTGTTGAGTGATTACGGTTGCAACGTGCCGGCGCCGGAGGCTCATCCGGCGAGCCAGTTCATGGCGGAGTGGTTTGAGGTTGGGGGCGGGTCACCGGGTCCGGGTATGAGACTGTGTTCACATTTGGGTTGTGGGCGACCCGAAACCAGGAAGCATGAGTTTCGGAGGTGTTCGGTTTGCGGTGCGGTGAATTACTGCTCACGGGCGTGCCAAGCGCTTGATTGGAAGTTCCGCCACAAGGCGGAGTGTGCTCCCGTTGAGAGGTGGCTCGATGAGGAGGGTGAAGATGTAGCCGGCGAAGATGACGGCGGCGGCGACGGTGAAGGGGCAGTGATGGTTAATAGTTAG 1047 0.5339 MRTRRGFSYPPIPTMFSDTVSRKRQKKSPDTTAGNSDFFESLPDDLVLSILCKLSSTASSPSDFVSVLITCKRLNSLALHSLVLSKASHKTFSVKAKNWCDSAHRFLKHCADAGNIEACYTLGMIRFYCLQNRGSGASLMAKAAMHSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVTEGRRFLVQANARELAASLAGSGCPLLSDYGCNVPAPEAHPASQFMAEWFEVGGGSPGPGMRLCSHLGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKAECAPVERWLDEEGEDVAGEDDGGGDGEGAVMVNS* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2306 348 Gene3D - 266 320 - -
Apr10g2306 348 SUPERFAMILY HCP-like 97 223 - -
Apr10g2306 348 MobiDBLite consensus disorder prediction 1 36 - -
Apr10g2306 348 SUPERFAMILY HIT/MYND zinc finger-like 271 321 - -
Apr10g2306 348 Gene3D Tetratricopeptide repeat domain 77 230 IPR011990 GO:0005515
Apr10g2306 348 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 15 228 - -
Apr10g2306 348 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 226 348 - -
Apr10g2306 348 Pfam MYND finger 277 316 IPR002893 -
Apr10g2306 348 MobiDBLite consensus disorder prediction 326 348 - -
Apr10g2306 348 ProSiteProfiles Zinc finger MYND-type profile. 274 316 IPR002893 -
Apr10g2306 348 SUPERFAMILY F-box domain 25 95 IPR036047 GO:0005515
Apr10g2306 348 PANTHER MYND DOMAIN-CONTAINING 226 348 IPR044508 -
Apr10g2306 348 PANTHER MYND DOMAIN-CONTAINING 15 228 IPR044508 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2306 Apr-Chr10 35082081 35083984 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2306 - - gmx:100797397 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2306 10 35082081 35083984 Apr2g1676 2 22421865 22423690 PCT