Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1672 ATGAGAGGATGGGAGTGGTTGTTGTTGAGCCTCTTCGTTCTGAGGATGGTTCACTCGGAGGGAGCAGATTTAGCGACGAAATGCAACATAGTGGTTGAGAAGGTGATTCCGTGTTTGAACTTTGCAACGGGACAGGTGGCGGTTCCGACGAAGGATTGCTGCGAGGCAACGTCGAAGATAAAGGAGAGTGATCCAGAGTGTCTGTGCTATGTCATTGAACAGACACATAAAGGCAATGCAGAGGTGAAAAGCATGGGTATTCAAGAGGATAGGCTCCTTCAGCTCCCTTCTGCTTGTAACTTGAAGAATGCCAGCGCCACCCACTGTCCCAAGCTTCTGGGTCTATCTCCAAACTCCCCTGACGCTGCTATCTTCATGAATGCTTCGTTGGGAACTAGTCCCTCTTCAACACTCGTCTCAGAGAACCACAATGGCTCCAATGGAAGCATGCTTAGGCCTTTTCTTATGCCATATCTAATATTAGCATTATTCTCCTTGCTATGA 504 0.4802 MRGWEWLLLSLFVLRMVHSEGADLATKCNIVVEKVIPCLNFATGQVAVPTKDCCEATSKIKESDPECLCYVIEQTHKGNAEVKSMGIQEDRLLQLPSACNLKNASATHCPKLLGLSPNSPDAAIFMNASLGTSPSSTLVSENHNGSNGSMLRPFLMPYLILALFSLL* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1672 167 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 109 IPR036312 -
Apr2g1672 167 Pfam Probable lipid transfer 12 109 IPR016140 -
Apr2g1672 167 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 1 9 143 - -
Apr2g1672 167 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 9 143 IPR043325 -
Apr2g1672 167 CDD AAI_LTSS 37 101 - -
Apr2g1672 167 SMART aai_6 28 109 IPR016140 -
Apr2g1672 167 Gene3D - 25 107 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1672 Apr-Chr2 22382036 22383501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1672 27 146 Acyl Lipid Metabolism Gene Families AT1G27950 50.394 3.60e-43 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1672 - - aprc:113855838 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2311 10 35119302 35121974 Apr2g1672 2 22382036 22383501 PCT