Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2311 ATGAAGCAACAAAGTAGAGTTAAGTTCTTGTGGCTATGCTTGTTTCTATGGATCGCGTGTGGATCCATTAACGGAGGAGATGATTTAACTCAAGAGTGTTCAGAGGTTGTTCAGAAGGTTATTCCCTGTTTGGACTTTGCCGCAGGAAAAGAAGCAACGCCGAAGAAGGAATGTTGCGATGCAGCTACAGTGATAAAAGACACGAAACCTCAGTGTTTATGCTTCATCATTCAAGAGACACATAAGGGTAGTCCTTCCATCAAAAACTTGGGCATTCAAGAAGCTAAGCTTCTTCAACTTCCTGATGCTTGCCATGTTAAAAACGCTAGCGTCGCTAACTGTCCTAAGCTTCTTGGTCTGCCTCCAAGTTCCCCGGATGCTGCAATCTTCACAAATTCCTCTAAGGCAACTCCTGCAAGTGCAACCCCACAAGGTACCTCACAGAGCCAAAACAGTTCGTATGGAAGTATGGTTAGACCTGGCATGGTGATGGATGTGATGATGGTGACTTTGGCCATTGTTCTCATTGCAATTCCAACCGGATTTATGAGCATTTATACATGA 564 0.4415 MKQQSRVKFLWLCLFLWIACGSINGGDDLTQECSEVVQKVIPCLDFAAGKEATPKKECCDAATVIKDTKPQCLCFIIQETHKGSPSIKNLGIQEAKLLQLPDACHVKNASVANCPKLLGLPPSSPDAAIFTNSSKATPASATPQGTSQSQNSSYGSMVRPGMVMDVMMVTLAIVLIAIPTGFMSIYT* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2311 187 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 1 12 180 - -
Apr10g2311 187 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 31 114 IPR036312 -
Apr10g2311 187 MobiDBLite consensus disorder prediction 129 153 - -
Apr10g2311 187 Gene3D - 30 112 IPR036312 -
Apr10g2311 187 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Apr10g2311 187 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 12 180 IPR043325 -
Apr10g2311 187 SMART aai_6 33 114 IPR016140 -
Apr10g2311 187 CDD AAI_LTSS 42 106 - -
Apr10g2311 187 Pfam Probable lipid transfer 28 114 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2311 Apr-Chr10 35119302 35121974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2311 32 178 Acyl Lipid Metabolism Gene Families AT1G27950 46.203 8.46e-44 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2311 - - gmx:100499777 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2311 10 35119302 35121974 Apr2g1672 2 22382036 22383501 PCT