Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1669 ATGGCAGCTGGAAAGTCTGGAAGTTTCAGGATGATGGAGCCTCTAAAGCATCCATCTAAGAAGTCTCGAAGAGATAAGAGCAGAGGAAAATCATCTGGAAGGTCCTCTAAGGCTGCAGTTATGGAACAACAAATTTGGAAAGATTTTCCTGAAGATTTAATCGAGCCTGTGATTGCACGGGTTCCCATTGCCACATTTTTCCGCTTCCGCTCTGTATGCCAACGATGGAATTCTCTGCTGACTTCTCAAAGTTTTTCTCAGTATTGTGCTGAAGTCCCACAAGCAAATCCATGGTTTTACACCATAGCTCATGAACATGCAAATTCTGGAGTCATGTATGACCCTTCTATGAAGAAATGGTACCATCGCGCTATATCAACCCTGCCTACAAAGTTGATAGTTTTACCGGTGGCTTCTGCAGGGGGTCTAGTTTGCTTTCTTGACATTTATCATCAGAACTTCTATGTTTGTAATCCACTGACTCAATCCTTCAAGGAGTTGCCGGCTCGATCAGTTAAGGTCTGGTCTCGTGTTGCTGTAGGGATGACAGTAAATAGGAACTCAACTGGTGTGGGCTACAAGATCCTATGGGTGGGTTGTGATGGAGAATATGAAATTTATGATTCAGTAAGAAAATCTTGGAGCTGTTCTGGAAACATGCCTGCAGACATTAAGCTGCCATTCTCACTCAATTTTAGGTCACAGGCTGTTTCAATTGACAGCACACTTTACTTCATGCATTCAGATCCAGAAGGGATTATTTCCTATGATATGACAACTGAGGTTTGGACACAGTACCTAATCCCGGTGCCATTGCATTTGACTGACCAGACACTGGCTGAGTGTGATGGTCGAATCATGCTTGTGGGGCTGCTCACAAAGAATGCTGCCACATGTGTGTGTATATGGGAGCTGCAGAAGATGACGTTCTTGTGGAAGGAGGTTGACAGAATGCCAAACGTATGGTGCTTAGACTTATATGGGAAGCACGTTAGAATGACTTGCTTGGGAAACAAAGGCTTGCTTATGTTGTCTTTAAGATCTAGACAAATGAATCGACTGGTTACTTACAACATGGCCAGTAGGGAATGGCTGAAGGTTCCTGGGTGTGTGCTGCCGCATGGAAGGAAAAGGCAATGGATAGTATATGGAAAGATGATGTTCATCACTGGTTTAACGAATATGATACGAATGTGTAATACTTCATGTTTCTTCATGCTCTCAGGTTTCAACTCAAGGCAAATACTTAGAAGATTGTGA 1260 0.4317 MAAGKSGSFRMMEPLKHPSKKSRRDKSRGKSSGRSSKAAVMEQQIWKDFPEDLIEPVIARVPIATFFRFRSVCQRWNSLLTSQSFSQYCAEVPQANPWFYTIAHEHANSGVMYDPSMKKWYHRAISTLPTKLIVLPVASAGGLVCFLDIYHQNFYVCNPLTQSFKELPARSVKVWSRVAVGMTVNRNSTGVGYKILWVGCDGEYEIYDSVRKSWSCSGNMPADIKLPFSLNFRSQAVSIDSTLYFMHSDPEGIISYDMTTEVWTQYLIPVPLHLTDQTLAECDGRIMLVGLLTKNAATCVCIWELQKMTFLWKEVDRMPNVWCLDLYGKHVRMTCLGNKGLLMLSLRSRQMNRLVTYNMASREWLKVPGCVLPHGRKRQWIVYGKMMFITGLTNMIRMCNTSCFFMLSGFNSRQILRRL* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1669 419 PANTHER BNAA07G08860D PROTEIN 1 385 - -
Apr2g1669 419 SUPERFAMILY F-box domain 35 92 IPR036047 GO:0005515
Apr2g1669 419 Pfam F-box domain 46 85 IPR001810 GO:0005515
Apr2g1669 419 ProSiteProfiles F-box domain profile. 43 88 IPR001810 GO:0005515
Apr2g1669 419 SUPERFAMILY Galactose oxidase, central domain 71 383 IPR011043 -
Apr2g1669 419 Gene3D - 46 85 - -
Apr2g1669 419 SMART fbox_2 49 89 IPR001810 GO:0005515
Apr2g1669 419 Gene3D - 99 382 IPR015915 GO:0005515
Apr2g1669 419 PANTHER F-BOX/KELCH-REPEAT PROTEIN 1 385 - -
Apr2g1669 419 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1669 Apr-Chr2 22352889 22356184 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1669 - - gmx:100775721 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2314 10 35143624 35146762 Apr2g1669 2 22352889 22356184 PCT