Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2314 ATGGAAGGGGTGGGGATGCTGAAGCAACTCATCGGTGAGCTTCAGCAGGTTTTGGACTCTTACCACTCTCATTCTCATTCTCATTCTTCTCTCATTCTTCAACCTTCTCATCACACTCTTCTCTTTCAACATCCCAGGTGGACCTCCCTTGACCTTGAAGATAGCTCCATAGATGACTGCTGTGGCCTTGTAATGGCAGCTGGAAAGTCTGGAAGTTTTGAGATGTTGGAGCCTCTCAAATCTCCACCTACTAAGAAGTCTCGAAGAGATAGAAGCAGGGGCAAATTTGGAAGATCTAGTACAACTGAAGTTATGGAACAAGAAGTTTGGAAAGATTTTCCTGAAGATTTATTTGAGGCCGTGATTGCACGACTTCCCATTGCGACATTTTTCCGCTTCCGCTCCGTATGCCGGAAGTGGAATTCCATGCTGACTTCTCAAAGTTTTTCTCAGCATTGTGCTCGAGTCCCACAAGAAAATCCATGGTTTTACACCGTTACCCACGAATGTGTGACTTCAGGAGCCATGTACGACCCTTCTTTGAAGAAATGGCATCACATTACTATAGCAAAACTGCCCACAAAATTGATGTTTCTACCAGTGGCTTCTGCAGGGGGTTTAGTTTGCTTTCTTGACATCGGTCATCGAAACTTCTATGTTTGTAACCCACTAAATCAATCCTTCAAGGAGTTGCCAGCTCGGTCAATTAAGGTCTGGTCTCGTGTTGCTGTAGGGATGACAATAAATGGAAACTCAGCTGGTTCTGGCTACAAAATCTTATGGGTGGGTTGTGATGGAGAATATGAAGTATATGACTCAGTCAGAAATTCTTGGAGTCGTCCAGGAAACATGCCTGCAGGTATGAAGCTGCCATTGTTGCTCAACTTTAGGTCTCAAGCTGTCTCTATTGACAGCACACTTCACTTCATGCGTTCGGATCCAGAAGGGATTGTTTCCTACGATATGACATCTGGGGTTTGGAAACAATACATAATCCCAGCGCCGTTGCATCTGACTGATCATACTCTGGCTGAGTGTGATGGCCAGATCATGCTTGTGGGCTTGCTCACAAAGAATGCAGCCACTTGTGTATGCATATGGGAGCTGCAGAAAATGACACTCTTGTGGAAGGAGGTTGACAGAATGCCAAACATATGGTGCTTGGACTTTTATGGGAAGCACGTTAAAATGACTTGCCTGGGTAACAAAGGCTTGCTCATGTTGTCTTTGAGATCAAAACAAATGAACCGGTTGGTTATATACAACATAGCAAGGAAAGAATGGCTGAAGGTTCCTGGGTGTGTGGTGCCGCATGGGAGAAAACGACAGGGGATAGCATGTGGTACTGCATTTCATCCATGCCTGACTGCAGTGGCATGA 1380 0.4522 MEGVGMLKQLIGELQQVLDSYHSHSHSHSSLILQPSHHTLLFQHPRWTSLDLEDSSIDDCCGLVMAAGKSGSFEMLEPLKSPPTKKSRRDRSRGKFGRSSTTEVMEQEVWKDFPEDLFEAVIARLPIATFFRFRSVCRKWNSMLTSQSFSQHCARVPQENPWFYTVTHECVTSGAMYDPSLKKWHHITIAKLPTKLMFLPVASAGGLVCFLDIGHRNFYVCNPLNQSFKELPARSIKVWSRVAVGMTINGNSAGSGYKILWVGCDGEYEVYDSVRNSWSRPGNMPAGMKLPLLLNFRSQAVSIDSTLHFMRSDPEGIVSYDMTSGVWKQYIIPAPLHLTDHTLAECDGQIMLVGLLTKNAATCVCIWELQKMTLLWKEVDRMPNIWCLDFYGKHVKMTCLGNKGLLMLSLRSKQMNRLVIYNIARKEWLKVPGCVVPHGRKRQGIACGTAFHPCLTAVA* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2314 459 PANTHER F-BOX/KELCH-REPEAT PROTEIN 44 458 - -
Apr10g2314 459 SUPERFAMILY Galactose oxidase, central domain 174 439 IPR011043 -
Apr10g2314 459 SMART fbox_2 113 153 IPR001810 GO:0005515
Apr10g2314 459 Pfam F-box domain 110 149 IPR001810 GO:0005515
Apr10g2314 459 MobiDBLite consensus disorder prediction 74 100 - -
Apr10g2314 459 Gene3D - 159 444 IPR015915 GO:0005515
Apr10g2314 459 SUPERFAMILY F-box domain 104 194 IPR036047 GO:0005515
Apr10g2314 459 PANTHER BNAA07G08860D PROTEIN 44 458 - -
Apr10g2314 459 ProSiteProfiles F-box domain profile. 107 152 IPR001810 GO:0005515
Apr10g2314 459 Gene3D - 110 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2314 Apr-Chr10 35143624 35146762 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2314 - - gmx:100810179 823.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2314 10 35143624 35146762 Apr2g1669 2 22352889 22356184 PCT