Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1547 ATGTTTGTGGGCCATCTTGGAGAACTCGCTCTATCTAGTGCTTCAATGGCTACTTCTTTTGCCTCTGTCACTGGTTTTAGCCTATTGGTGGGAATGGCTAGTGCATTGGATACCGTATGTGGCCAGTCATATGGAGCAAAGCAGCACCATATGTTAGGCATACACATGCAAAGAGCCATGCTTGTTGTTATGATTGTTAGCATACCCCTAGCAATTACTTGGGCTAACACAAGATCCATTCTAATTGCCCTTGGCCAAGATCCTGAAATATCTGCAGAAGCTGGACAATATGCTAAGCTAATGATTCCAAGCCTTTTTGCCTATGCCCTTCTTCAGTGCCTGAACAGATTCTTGCAAACCCAAAATAATGTATTTCCAATGATGTTCAGTTCTGGAGTTACTACTTTGTTACATATTTTTATATGTTGGACTTTAGTATTCAAATCTGGACTAGGGAACAAAGGAGCTGCCATAGCTAATGCTATATCTTACTGGATAAATGTCTTGATCCTAACACTCTATGTCAAATTTTCTCCCTCATGTTCAAAAACTTGGACTGGATTTTCAACAGAAGCATTGCACGGCATCCTCTCTTTTCTGAGACTTGCAATTCCTTCGGCTGTTATGGTTTGCTTGGAAATGTGGTCATTTGAAATGATGGTTCTCCTTTCTGGCCTTCTTCCAAATCCAAAATTAGAAACATCAGTGCTTTCAATCTGTTTGAATACTTCGACAACTATTTGGATGATTCCCTTTGGACTCAGTGGAGCTGTAAGCACGCGTGTCTCAAATGAACTAGGAGCTGGTTATCCAAGGGCTGCACGTTTAGCTGTGTATTTTGTCTTTATAATGGCCATTATTGAGGGCGCCTTTGTTGGAGCAGTGATGATACTAATACGCAATATTTGGGGCTATGCGTACAGTAATGAAGAAGAAGTGGTCAAATATGTAGCTATCATGTTGCCAATTCTTGCTTCATCCATTTTCCTTGATGGACTACAGTGTGTTCTTTCAGGAACAGCTAGAGGATGTGGTTGGCAAAAAATAGGTGCTTTCATTAATCTAGGATCATACTATTTAGTTGGGATTCCATCAGCTATCTTATTTGCTTTTGTATTGCACATTGGTGGGAAGGGGCTTTGGCTAGGGATCATATGTGCACTCGTTGTTCAAGTGTCATGTCTTTTGATCATTACAATACGAACTGATTGGGAACAAGAGGCAAAGAAGGCTAAGGATAGAATCTATGATTCAATGAGAGCTGAAGTCATAATCTCATGA 1281 0.4052 MFVGHLGELALSSASMATSFASVTGFSLLVGMASALDTVCGQSYGAKQHHMLGIHMQRAMLVVMIVSIPLAITWANTRSILIALGQDPEISAEAGQYAKLMIPSLFAYALLQCLNRFLQTQNNVFPMMFSSGVTTLLHIFICWTLVFKSGLGNKGAAIANAISYWINVLILTLYVKFSPSCSKTWTGFSTEALHGILSFLRLAIPSAVMVCLEMWSFEMMVLLSGLLPNPKLETSVLSICLNTSTTIWMIPFGLSGAVSTRVSNELGAGYPRAARLAVYFVFIMAIIEGAFVGAVMILIRNIWGYAYSNEEEVVKYVAIMLPILASSIFLDGLQCVLSGTARGCGWQKIGAFINLGSYYLVGIPSAILFAFVLHIGGKGLWLGIICALVVQVSCLLIITIRTDWEQEAKKAKDRIYDSMRAEVIIS* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1547 426 TIGRFAM matE: MATE efflux family protein 1 381 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr2g1547 426 PANTHER PROTEIN DETOXIFICATION 1 414 - -
Apr2g1547 426 CDD MATE_eukaryotic 1 410 IPR045069 GO:0042910|GO:1990961
Apr2g1547 426 Pfam MatE 1 144 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr2g1547 426 Pfam MatE 205 367 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr2g1547 426 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1547 Apr-Chr2 21360148 21364233 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1547 K03327 - gmx:100792588 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1014 6 14837589 14842365 Apr2g1547 2 21360148 21364233 ECH
Apr2g1547 2 21360148 21364233 Apr2g1547 2 21360148 21364233 ECH