Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1384 ATGGAGAGCACACTGAAGGCTCTGAGAGATGGTGAGTCAGTGTTGGACCTCAGCCCAAGATCCAGCGTCAGCGGCGGTGTTGAGGATATCTACGGTGAGGATCGCGCCACCGAGGACCAACTTGTCACCCCTTGGACTTTCTCGGTTGCCAGTGGGTATTCTCTGCTAAGGGATCCACAGTACAACAAAGGGTTGGCTTTCACTGAGATAGAGAGGGATGCACACTATTTGCGTGGCCTTCTGCCTCCCACTGTCAGCACTCAGCAACTTCAGGAAAAGAAACTGATGAACAGCATCCGACAGTATCAAGTTCCCTTGCAAAAATACATGGCCATGATGGACCTTCAGGAGAGGAATGAAAGGCTGTTTTACAAACTTCTGATTGATAATGTTGAGGAATTGCTCCCAGTTGTATATACTCCTACTGTTGGTGAGGCTTGCCAGAAATATGGAAGCATATTCAGGCGTCCTCAGGGTCTTTACATTAGTTTGAAAGAGAAGGGGAAAATCCTTGAGGTTTTGAAAAACTGGCCTGAGAGGAGTATTCAAGTTATTGTTGTAACTGATGGTGAGAGGATTTTGGGACTTGGGGATCTTGGATGTCAGGGGATGGGAATTCCTGTTGGTAAATTGGCTTTATACACAGCACTAGGAGGAGTTCGTCCTTCAGCATGTTTGCCTATTACGATTGATGTGGGGACTAATAATGAGCAATTACTAAATGATGAATTTTACATTGGGCTTAGACAAAAGAGGGCAACTGGGCAGGAATATTATGAACTTCTGCATAAGTTCATGACTGCTGTGAAGCAAAACTACGGGGAAAAAGTTCTTGTACAGTTTGAAGATTTTGCAAATCACAATGCTTTTGAGTTGCTTGCAAAATATGGTACAACTCATCTTGTTTTCAATGATGATATACAGGGGACTGCATCCGTTGTTCTAGCTGGTGTTGTAGCAGCCCTGAAGCTCATAGGAGTTACCTTGGCTGATCACACATTCCTCTTCCTTGGTGCAGGAGAAGCAGGTACTGGTATAGCAGAGCTAATAGCTCTTGAGATGTCAAAGCAGACTAAGACACCTATAGAAGAGAGTCGCAAGAAGATATGGCTTGTAGACTCAAAGGGTTTAATTATAATCAAGCCAACAATTTTGATTGGATCATCAGGAGTAGGAAGAACATTTACAAAGGAAGTAGTTGAGGCTATGACCAGAAACAATGATAAACCTCTCATTATGGCTCTTTCCAATCCAACCTCGCAGTCTGAGTGTACAGCTGAAGAGGCTTACCAGTGGAGTGAGGGTCGTGCAATTTTTGCTAGTGGGAGTCCATTTGATCCTGTTGAATACAAGGGCAAAGTTTACGCATCTGGCCAGGCCAACAATGCTTACATTTTCCCAGGCTTTGGTTTGGGTTTAGTAATCTCAGGAGCAATTCGAGTGCATGATGATATGCTTCTAGCAGCCTCGGAAGCATTGGCTAAACAAGTGACACAGGAGAACTACAAACAGGGTTTGATTTACCCTCCATTTCCTAATATCAGAAAAATTTCAGCTAACATAGCTGCAAATGTTGCTGCCAAAGCATATGAATTAGGCTTGGCTACACATCTACCTCGTCCTCAGAATCTTGTGAAGTATGCGGAGAGTTGCATGTATACCCCTGTATACCGCAACTATAGGTGA 1686 0.4401 MESTLKALRDGESVLDLSPRSSVSGGVEDIYGEDRATEDQLVTPWTFSVASGYSLLRDPQYNKGLAFTEIERDAHYLRGLLPPTVSTQQLQEKKLMNSIRQYQVPLQKYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYYELLHKFMTAVKQNYGEKVLVQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGVTLADHTFLFLGAGEAGTGIAELIALEMSKQTKTPIEESRKKIWLVDSKGLIIIKPTILIGSSGVGRTFTKEVVEAMTRNNDKPLIMALSNPTSQSECTAEEAYQWSEGRAIFASGSPFDPVEYKGKVYASGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTQENYKQGLIYPPFPNIRKISANIAANVAAKAYELGLATHLPRPQNLVKYAESCMYTPVYRNYR* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1384 561 ProSitePatterns Malic enzymes signature. 303 319 IPR015884 GO:0004471
Apr2g1384 561 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 307 560 IPR036291 -
Apr2g1384 561 PRINTS Malic enzyme signature 122 146 IPR001891 GO:0004470|GO:0004471
Apr2g1384 561 PRINTS Malic enzyme signature 182 211 IPR001891 GO:0004470|GO:0004471
Apr2g1384 561 PRINTS Malic enzyme signature 218 240 IPR001891 GO:0004470|GO:0004471
Apr2g1384 561 PRINTS Malic enzyme signature 278 296 IPR001891 GO:0004470|GO:0004471
Apr2g1384 561 PRINTS Malic enzyme signature 303 319 IPR001891 GO:0004470|GO:0004471
Apr2g1384 561 PRINTS Malic enzyme signature 334 350 IPR001891 GO:0004470|GO:0004471
Apr2g1384 561 PRINTS Malic enzyme signature 433 449 IPR001891 GO:0004470|GO:0004471
Apr2g1384 561 Pfam Malic enzyme, NAD binding domain 380 529 IPR012302 GO:0051287
Apr2g1384 561 Pfam Malic enzyme, NAD binding domain 307 378 IPR012302 GO:0051287
Apr2g1384 561 SMART malic_2 116 297 IPR012301 GO:0004471
Apr2g1384 561 SMART Malic_M_2 307 530 IPR012302 GO:0051287
Apr2g1384 561 Pfam Malic enzyme, N-terminal domain 116 296 IPR012301 GO:0004471
Apr2g1384 561 Gene3D - 380 561 - -
Apr2g1384 561 Gene3D - 305 379 - -
Apr2g1384 561 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 29 306 IPR046346 -
Apr2g1384 561 CDD NAD_bind_1_malic_enz 307 555 - -
Apr2g1384 561 Gene3D - 50 304 IPR037062 GO:0004471
Apr2g1384 561 PANTHER MALIC ENZYME-RELATED 4 379 - -
Apr2g1384 561 PANTHER MALIC ENZYME-RELATED 380 561 - -
Apr2g1384 561 PIRSF ME 379 561 IPR001891 GO:0004470|GO:0004471
Apr2g1384 561 PIRSF ME 31 381 IPR001891 GO:0004470|GO:0004471
Apr2g1384 561 PANTHER MALIC ENZYME 4 379 - -
Apr2g1384 561 PANTHER MALIC ENZYME 380 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1384 Apr-Chr2 19948824 19954132 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1384 K00029 - gmx:100782096 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1384 2 19948824 19954132 Apr2g2475 2 29163230 29169350 ECH
Apr2g1384 2 19948824 19954132 Apr10g0936 10 21905206 21910631 ECH
Apr2g1384 2 19948824 19954132 Apr5g1084 5 15485855 15490788 ECH
Apr2g1384 2 19948824 19954132 Apr2g1384 2 19948824 19954132 ECH
Apr2g1384 2 19948824 19954132 Apr6g1169 6 16327732 16332607 PCT