Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1223 ATGGCAGCGACAACTACAACAACTTTCCTCAAAGTTCAAAACCAGCCCACAAAGCCCAAACGACGCAAGTATCGCGAAACTACCATCTCCGCTTCTGCTTCTCCAAACGACACGCACACCACCCCACGCCGCACTCACGATTTCCCTTTATGCGCGACCCGGAACCCGGAACCCGAACCCGACACAGCATTACCCGATTCTCCCTCAACTTACAAGATTCGGTTCTCTCCCGGTGGCTTTTCCCCAATCATGGACTTCACCCACGGTTCCCCTATTGCCACCGTAAACGGGCATTCGGGTCATGACCCGTTTCCTTCAAGCTTCTCAAAGTTCAACTCTGCACTCACCGCGGGCCTCCTTAACCCAATGTCGCCTCCACCCGATAAGGCCCGATCGAGCCCAACGCTTTTCGAAATGATGGCTAGTGAACCCGATATTCAGCAGAGACCCACCCAAATGGTACCCAACAATGTTGCTGCTTCGTCGGTGCAGAAACCCCAAATTCAGGTGCTGGATCGCCAAACCCTAATGATGCAGCGGATTTCGGAGTTGTTGGGGTCTCGTAGCCCTGGGAACCAGTTCAACGACGCCGTTTCCAGTGATATTAAGCTAACGCTTAGTTCCAAGGATGGGATTAGTGTCTCCATGAACGTGCATCGCCAAATCCTCGTTGCTCATAGTAGGTTCTTTGCAGTGAAGCTCTCTGATCGGTGGACCAAGCAGCAGCAACAGCGCTCGCCGTTGCCCTACGAGGTTGAAATCGCCGATTGCGATGATGTTGAGGTTTATATTGAGACTTTGAGGTTGATGTATTGTAAGGATCTTAGGAAGAGGTTGATGAAGGAGGACGTGTCCAGAGTTCTGGGTATCTTAAAGGTTTCGGCTGCAATTGGATTTGATGCTGGCGTTTTGTCTTGTCTGGAGTACTTGGAAGCAGCCCCATGGGCAGAGGATGAAGAAGAGAAGGTGGCCTCACTCCTGTCTGAGCTTCATCTTGAAGCAGTTGGTGCTGGGGAAGTTTTGAAGAGGGTTTCGACTGATGTTGCCAATGGAAATGGAAATGAAGAGGGGAATGATAATGAGGAAGTTCTTCTTAAACTTATTCGTGTGGTTCTTGAAGGTAAAGATGAGAAGGCCAGGCGCGAGATGAAAGGGTTAGTGTCAAAGATGCTCCGTGAGAATTCTTCTCAGAATGATCTTCGGAAGGAGTCATTGTACTTAGCATGTGATGATTGTCTGCAGTTACTTCGTCGTCACTTTTTGCAGGCTGCTGCTTCGGAGCTGCAGGATGTGAGTCAAATTGCACGACAAGCAGATAATTTGCATTGGATTTTGGATATTTTAATTGACAGACAGATTGCTGAGGATTTCCTGAAAACATGGGCATCTCAATCAGATTTAGCTGAAGCTCATCCAAAAGTGCCAGCAGTTCACAGGTTTGAGGTTAGCAGAGTAACAGCAAGGCTGTTTGTTGGGATTGGGAAAGGACAATTACTGGCTTCTAAAGATGTTAGGTGTTTACTTCTGAAAACATGGCTGGTGCCCTTTTATGATGACTTTGGTTGGATGAGGAGGGCAACCAAGGGCCTTGATAGGCACCTAATTGAGGATGGTCTTAGTAACACAATTCTCACTCTGCCACTCTCCTGGCAACAGGAAATTTTGCTTGCTTGGTTTAATCGTTTCTTGAATTCTGGTGAAGATTGCCCAAATATTCAAAGAGGGTTTGAAGTTTGGTGGAGAAGGGCGTTCTGGAAGAGGAATGGAGAGCAAGAACGGACAAGACCATTACGAATTACAACCACATCAGTTGAGAACCCTTGA 1824 0.4792 MAATTTTTFLKVQNQPTKPKRRKYRETTISASASPNDTHTTPRRTHDFPLCATRNPEPEPDTALPDSPSTYKIRFSPGGFSPIMDFTHGSPIATVNGHSGHDPFPSSFSKFNSALTAGLLNPMSPPPDKARSSPTLFEMMASEPDIQQRPTQMVPNNVAASSVQKPQIQVLDRQTLMMQRISELLGSRSPGNQFNDAVSSDIKLTLSSKDGISVSMNVHRQILVAHSRFFAVKLSDRWTKQQQQRSPLPYEVEIADCDDVEVYIETLRLMYCKDLRKRLMKEDVSRVLGILKVSAAIGFDAGVLSCLEYLEAAPWAEDEEEKVASLLSELHLEAVGAGEVLKRVSTDVANGNGNEEGNDNEEVLLKLIRVVLEGKDEKARREMKGLVSKMLRENSSQNDLRKESLYLACDDCLQLLRRHFLQAAASELQDVSQIARQADNLHWILDILIDRQIAEDFLKTWASQSDLAEAHPKVPAVHRFEVSRVTARLFVGIGKGQLLASKDVRCLLLKTWLVPFYDDFGWMRRATKGLDRHLIEDGLSNTILTLPLSWQQEILLAWFNRFLNSGEDCPNIQRGFEVWWRRAFWKRNGEQERTRPLRITTTSVENP* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1223 607 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 16 605 IPR038920 -
Apr2g1223 607 Gene3D Potassium Channel Kv1.1; Chain A 172 313 IPR011333 -
Apr2g1223 607 MobiDBLite consensus disorder prediction 1 68 - -
Apr2g1223 607 ProSiteProfiles BTB domain profile. 200 271 IPR000210 GO:0005515
Apr2g1223 607 MobiDBLite consensus disorder prediction 1 15 - -
Apr2g1223 607 PANTHER OSJNBA0011J08.25 PROTEIN 16 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1223 Apr-Chr2 18438559 18441809 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1223 - - ccaj:109800730 1027.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1223 2 18438559 18441809 Apr2g1223 2 18438559 18441809 ECH
Apr2g1223 2 18438559 18441809 Apr1g0452 1 5558481 5561411 PCT