Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0452 ATGTTAAAAGAGCATCATTTCAGAACAAAACAGACACATCGATGTCACCACACTCACTCTGACTCATTCAGCGCCAACATGGACCCTTCCCATCGCCGGCGACGCCGCACGTGGTGTTGCTCCTTCGCCGTTCCACCTTCCAGCCCCGACAACCCTTCCTCCAAACCTCGCCACCGCAAGTCCGAACCTCACTCCAAGCCGACCTTCTCCCTCCCAACCTCACCCCAGAGCACCAAATCCGCCTCACGAATCGTCCCTCGAATCGACCCCCGCCGGATCTTATCTCCGGGAAGAGTCTCACCCATAGATTCCGATCCCGTCATCCAAAACGTCGTTCCTGATCCGTCGCCGGAGCCCCAGTTGCGATCCCGGAGCCTCCGGGCACCACTCGACGGAGACGTGTCGCCGGCCCCGGAAAGGGAGGGACTTGACGTGAGAATGAGTCTGAGAGGGAAGAACGGTGGGTGTATGGTTCTGGAGCTGAATTCGGGGGTTCTGTGTGCGAATTCGGAAGTGTTTGCGGGGTTGATAGCGGATTATAAGAAAGGGGTTTCGTCTTCGAGTGGAAGCACCAAAATGTGTAGAATAGAGGTTCCTGAAGTTGACAACTTGGGAGTGTTCAGAGACACCATTGAGCTTATGTTTGAGAATGACAATGATGTTACCAAAAGGCTCCTCAAAATTGGCGTTTTTCGATCCATTGACGTTTTGGAGGTGTCAGCAGGCATCATGTTCACTAAGGGTGTGTTGTCATGTTTACAATACCTTGAAGCTGTTCCTTGGACTGAAGAAGAGGAAGAAAAATTGAGGAGCCTATTCACTAGATTCAAGTTTGATGAAGCAACAACAAGAGACATCCTAGGAAGGCTTTACTTGCACGATTCGGTAGATCCACAACCAAATGTAGCTAGACAACTAGTTTGGTCTATCACCACTTGTGTGGATGCCAATGCAAGAAATGAATTGAAGTCACTAGTGAAGGGTCTTCTTTGCAAGAGCTCAGTCTATGAGAAGAATCATCTTGACCTCAGCAAGGAAGATCTGTATTCTGTTTGCCACTCATGTCTTGACTCATTGGTAAGCCTCTTTGAAGAGGCATCAAGCACCATCTCTCCTGAAAGATTGACAAAGAAAGATAAGAATAAACCACTAATTGAGCGTGTCTCAAGACAAGTTGATAACATCAACTGGTTGCTCGAAATCATGCTTGATGGGCAAATAGCAGAGGACTTTGTGGATACATGGGCAAATCAACACCAACTTGTTAAAATGCATGATAATGCATCCCCCATGATTAGATATGAACTAAGTCGAGTTTCGGCAATTCTGTTTGTTGCAATGGCTACAAGAAAATTACAATGCCGGTTGGAAGCTAGATCAGGGCTTCTTCAAGGATGGTTCAAGCCTATGTTGTTGGACTTTGGGTGGTTGCAAAGATGCAGAAAAGGGCTTGATATAAAGGTCTTGCAAGAGGCTATGGGTCAGACACTTCTTACTCTGCCTCTAAATCAACAATACTTGCTGTTCATGGAATGGTTTAGGCACTTCTCAAGGCATGGCACTGAATGTCCCAATCTAAGCAAGGCATTCCAAATTTGGTGGCGTCGATCATTTTTAAGAGGCTCTGAAACTTATGCTATTGAATCAAGGTGA 1653 0.4701 MLKEHHFRTKQTHRCHHTHSDSFSANMDPSHRRRRRTWCCSFAVPPSSPDNPSSKPRHRKSEPHSKPTFSLPTSPQSTKSASRIVPRIDPRRILSPGRVSPIDSDPVIQNVVPDPSPEPQLRSRSLRAPLDGDVSPAPEREGLDVRMSLRGKNGGCMVLELNSGVLCANSEVFAGLIADYKKGVSSSSGSTKMCRIEVPEVDNLGVFRDTIELMFENDNDVTKRLLKIGVFRSIDVLEVSAGIMFTKGVLSCLQYLEAVPWTEEEEEKLRSLFTRFKFDEATTRDILGRLYLHDSVDPQPNVARQLVWSITTCVDANARNELKSLVKGLLCKSSVYEKNHLDLSKEDLYSVCHSCLDSLVSLFEEASSTISPERLTKKDKNKPLIERVSRQVDNINWLLEIMLDGQIAEDFVDTWANQHQLVKMHDNASPMIRYELSRVSAILFVAMATRKLQCRLEARSGLLQGWFKPMLLDFGWLQRCRKGLDIKVLQEAMGQTLLTLPLNQQYLLFMEWFRHFSRHGTECPNLSKAFQIWWRRSFLRGSETYAIESR* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0452 550 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 30 550 IPR038920 -
Apr1g0452 550 MobiDBLite consensus disorder prediction 1 139 - -
Apr1g0452 550 PANTHER OS04G0278000 PROTEIN 30 550 - -
Apr1g0452 550 MobiDBLite consensus disorder prediction 16 35 - -
Apr1g0452 550 MobiDBLite consensus disorder prediction 1 15 - -
Apr1g0452 550 MobiDBLite consensus disorder prediction 66 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0452 Apr-Chr1 5558481 5561411 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0452 - - gmx:100777771 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0452 1 5558481 5561411 Apr1g0452 1 5558481 5561411 ECH
Apr2g1223 2 18438559 18441809 Apr1g0452 1 5558481 5561411 PCT