Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1100 ATGAATTCAAACAGAGGGGGTGAAAGACCTTTCACTATGGCAAACGATGATTATTCTTCCAAGGGGAAAAACATATTGGAATCTCATCCAGAAACTGAGCAATTAACTCAAGGTGTTGCTGAGGAAGATGATGGGGAATGGGTGGTATATGCAAGGAAATCTAAGAGTAAGGCTAGAAGCAGTGCTACTAAACCATGGAGTCCTCCAGTTCATAATTCTAATTCTAGAGGAGTGGGAAATACAGAGATGACTCAAAAGCCGGTCAATCGGAATCATGGTGGAGTTGGAAGGGCTTCTGGCAGTAGAAATCCTTGGCAGTCCCAAAATGACAACTTCAAGAGACCTGTCAGCGGAGGAAATGAAATGCCGCAGTTGATTACTAGTGAATCTGAAAGCAACAGTGTGACTTCAAACCCATTTATTCAACCTCCGCTGGAGCATGGGTGGAATTGGAAATCTAGAACTGGTTCTAAACAGTCCAAGAGTGGTGATGATAGCCTGGTAAAGGATGAAATTACAGTAGAGTCCCCTGTGAAGAATGATAGTGTTGATGATGAGGGGGAGGAGGGCTTTGATGTTATGGAAGACACTGATGACGATCTAATCAGTGATGATTATGATTCTGATACTAGTCAAAAGAGCCATGAAACTCGTAAGAAGAACAAATGGTTTAAGAAATTCTTTGAGATTTTGGATTCCCTAAATGTTGAAAAGATAAATGAAACTGAAAGGCAGTGGCACTGTCCAGCTTGTCGAGGTGGTCCTGGTGCTATTGATTGGTATAGTGGGCTGCAACCTCTTTTGACTCATGCTAAAACAAAGGGGTCAAAAAGGGTGAAGATCCATAGGGAGTTTGCTGAGCTTTTGGATGAGGAATTGCGCAGAAGAGGTACTTTGGTAATTCCAGCTGGGGAAGTATTTGGTAAGTGGAAAGGCTTAAAAGATGAGGATAAAGATCATGAAATAGTTTGGCCTCCGATGGTTGTTATTCAGAATACAAGGCTTGAACAGGATGAAAATGACAAGGGTCATCGGGGGATGAGTGTTTTGATATTTGAAGCCTCAGCTGTAGGTTATCTTGAGGCTGAGTGCCTGCACAAGCATTTTGCAGAACAAGGAACTGATCGAGATGCATGGTTTAGTCACTACCGTAAATTGTTCCTCCCTGGTGGCAGGCGACAACTCTATGGATACATGGCTGTAAAAGAAGACCTGGATTTTTTCAACAGGCATTCCCAAGGTAAATCTAGACTCAAATATGACATGAGATCTTATCAGGAGATGGTTGTAAACCAACTTCGGCAAATGAGTGAGGACAATCAACAACTTATTTATTTCAAGGACAGGGACGTCAAAAAAGAAAAACACGCAAAAGCTCTTGAAGAATCTTTGGGTATAGTGACTGAGAAGCTGCGAAGGACGATGGAGGAAAATCGTATTGTGAGGTTGAGAACTAAAATGCAACATGAAGAGAACAAGGAAGAGATGTACATGCAAGAACAATTTTTCAAGGATCAGATCAAAATCATTCACGATTCAAGGACTGAAAAGGAAGAAGATTTTGAGAGGATGCAACAAGAGAAACGTGAGAAGGTGAAGCAGTTAAGTGCTGGTCATTTAAATGAAGAGGAAAGGAGAGTCAAGTCGGATGAATATCTAAAATTTGTTGAATTTCAAGATAAAGAAATGGAAAACTTTGTTGCTGAAGAGGAGAAACTCCGTCAAGCTCATAAAGACAACATTGCTGCAATGACCCGGAGATATTGGGAGGAAAAGGTGCAGTGGGAGGAAAAGTTTAATAAGGAACTAGCCAAGCTGATGGAGAAGTACTCCCTATCTCACCCAGAAACAAAGTCCAATGGTATCTGA 1869 0.4147 MNSNRGGERPFTMANDDYSSKGKNILESHPETEQLTQGVAEEDDGEWVVYARKSKSKARSSATKPWSPPVHNSNSRGVGNTEMTQKPVNRNHGGVGRASGSRNPWQSQNDNFKRPVSGGNEMPQLITSESESNSVTSNPFIQPPLEHGWNWKSRTGSKQSKSGDDSLVKDEITVESPVKNDSVDDEGEEGFDVMEDTDDDLISDDYDSDTSQKSHETRKKNKWFKKFFEILDSLNVEKINETERQWHCPACRGGPGAIDWYSGLQPLLTHAKTKGSKRVKIHREFAELLDEELRRRGTLVIPAGEVFGKWKGLKDEDKDHEIVWPPMVVIQNTRLEQDENDKGHRGMSVLIFEASAVGYLEAECLHKHFAEQGTDRDAWFSHYRKLFLPGGRRQLYGYMAVKEDLDFFNRHSQGKSRLKYDMRSYQEMVVNQLRQMSEDNQQLIYFKDRDVKKEKHAKALEESLGIVTEKLRRTMEENRIVRLRTKMQHEENKEEMYMQEQFFKDQIKIIHDSRTEKEEDFERMQQEKREKVKQLSAGHLNEEERRVKSDEYLKFVEFQDKEMENFVAEEEKLRQAHKDNIAAMTRRYWEEKVQWEEKFNKELAKLMEKYSLSHPETKSNGI* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1100 622 MobiDBLite consensus disorder prediction 100 143 - -
Apr2g1100 622 Gene3D XS domain 342 465 IPR038588 -
Apr2g1100 622 Gene3D XS domain 314 341 IPR038588 -
Apr2g1100 622 MobiDBLite consensus disorder prediction 60 88 - -
Apr2g1100 622 Pfam XS domain 340 405 IPR005380 GO:0031047
Apr2g1100 622 MobiDBLite consensus disorder prediction 1 215 - -
Apr2g1100 622 MobiDBLite consensus disorder prediction 163 184 - -
Apr2g1100 622 MobiDBLite consensus disorder prediction 185 205 - -
Apr2g1100 622 Coils Coil 473 500 - -
Apr2g1100 622 Coils Coil 514 534 - -
Apr2g1100 622 PANTHER PROTEIN SUPPRESSOR OF GENE SILENCING 3 15 613 - -
Apr2g1100 622 Coils Coil 567 587 - -
Apr2g1100 622 Pfam XS zinc finger domain 248 286 IPR005381 GO:0031047
Apr2g1100 622 PANTHER PROTEIN SUPPRESSOR OF GENE SILENCING 3 15 613 IPR044287 GO:0031047|GO:0051607
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1100 Apr-Chr2 17321390 17325911 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1100 - - gmx:100807738 1011.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1100 2 17321390 17325911 Apr2g1100 2 17321390 17325911 ECH
Apr2g1100 2 17321390 17325911 Apr1g0366 1 4535060 4541893 PCT