Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1089 ATGGCAGCTGAGCTAGTCAATGCTGCAACAAGTGAGAAATTGGCTGAAACTGATTGGATGAAAAATATTGAAATCTGTGAATTAGTTGCCCATGATCAAAGGCGAGCTAGAGATGTTGTTAAGGCTATAAAAAAGAGACTGGGTAACAAGAACCCTAATGCTCAACTTTTTGCAGTCACGTTGCTGGAAATGTTGATGAACAATATTGGGAATCATATTCATCAGCAGGTGATTGATACAGGAATTATTCCTATTCTTGTGAAAATTGTGAAGAAAAAGTCAGATTTGCCAGTAAGGGAGCGGATATTTCTCCTACTAGATGCCACACAAACATCCCTTGGTGGTGCTTCTGGAAAGTTTCCACAGTATTATAATGCATATTATGATTTGGTGAGTGCTGGGGTGCAATTTCCTCAAAGGCCTCAAGTGGTACAATCAAATCGTCCTCATTCACAACCTAATAGGACTAACAATGTACCTAACAGGGAGCAGGCCCCACCTAGACATGAAGGGGTTCCTCAGCAGTCAGAGTCCCGGACTGTTCCTGAGTCTAGCATTATTCAAAAGGCTAGCAATGCATTAGAAGTTTTAAAAGAAGTCCTTGATGCTGTTGATGTCCATAATCCTCAGGCGGCAAGAGATGAATTCACCCTTGACCTTGTTGAACAATGTTCATTTCAGAAGCAAAGGGTAATGCATCTTGTGATGGCTTCTCGAGATGAGAGGATAGTTTCTCAAGCAATTGAATTGAACGAGCAACTTCAGAAAGTTCTTGCAAGACACGATTGCCTTCTTTCGGGCAGAGCCACAACAATCGCTAATCACTTAGACTGTGACCAAGCAGAGGAGGAAGAAGAAGCTGAACAGTTATTCCGGAGATTACGTAAAGGAAAGGCTTGTGCAAGGCCTGAAGATGATGAAGCTGAGTTCCCTCACTTGGGTTTGCTTGAAGAGAGACTCAACCGTCCGCTGATAAGACCACTCTCGTTGGAGCCATCTCGGGAAGCTAATACTCGTTCTGCACCAGCAGTGATTCCTCTGCCAAGTGCAAAACAGAACGGGGAGCTTCATCATGTGGCAATTCCGCCGCCACCTGCAAAGCACGTTGAGAGGGAGAGATATTTTCAGGAGAATAAGAAAGATGGTGCTACTTTGGCTGGCCACTTGAGAGGCCTCTCGTTGCATAGTCACAACGGTAGCAGCTCTCATAGTGGAAGCTTTGATTTTAGTGATTGA 1236 0.4401 MAAELVNAATSEKLAETDWMKNIEICELVAHDQRRARDVVKAIKKRLGNKNPNAQLFAVTLLEMLMNNIGNHIHQQVIDTGIIPILVKIVKKKSDLPVRERIFLLLDATQTSLGGASGKFPQYYNAYYDLVSAGVQFPQRPQVVQSNRPHSQPNRTNNVPNREQAPPRHEGVPQQSESRTVPESSIIQKASNALEVLKEVLDAVDVHNPQAARDEFTLDLVEQCSFQKQRVMHLVMASRDERIVSQAIELNEQLQKVLARHDCLLSGRATTIANHLDCDQAEEEEEAEQLFRRLRKGKACARPEDDEAEFPHLGLLEERLNRPLIRPLSLEPSREANTRSAPAVIPLPSAKQNGELHHVAIPPPPAKHVERERYFQENKKDGATLAGHLRGLSLHSHNGSSSHSGSFDFSD* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1089 411 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 1 411 - -
Apr2g1089 411 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Apr2g1089 411 CDD GAT_GGA_like_plant 186 262 - -
Apr2g1089 411 Gene3D - 2 136 IPR008942 -
Apr2g1089 411 MobiDBLite consensus disorder prediction 142 184 - -
Apr2g1089 411 SUPERFAMILY GAT-like domain 144 267 - -
Apr2g1089 411 PANTHER TOM1-LIKE PROTEIN 1 411 IPR044836 GO:0035091|GO:0043130|GO:0043328
Apr2g1089 411 Pfam GAT domain 192 266 IPR004152 GO:0035091|GO:0043130
Apr2g1089 411 SUPERFAMILY ENTH/VHS domain 4 140 IPR008942 -
Apr2g1089 411 MobiDBLite consensus disorder prediction 376 411 - -
Apr2g1089 411 Gene3D - 176 274 IPR038425 -
Apr2g1089 411 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Apr2g1089 411 CDD VHS 2 130 - -
Apr2g1089 411 MobiDBLite consensus disorder prediction 142 163 - -
Apr2g1089 411 MobiDBLite consensus disorder prediction 394 411 - -
Apr2g1089 411 Pfam VHS domain 5 111 IPR002014 GO:0035091|GO:0043130
Apr2g1089 411 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1089 Apr-Chr2 17237721 17244138 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1089 - - gmx:100802949 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1089 2 17237721 17244138 Apr2g1089 2 17237721 17244138 ECH
Apr2g1089 2 17237721 17244138 Apr1g0381 1 4751622 4757277 PCT