Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0381 ATGGCAGCTGAGCTAGTCAATGCTGCAACAAGCGAAAAACTGGCTGAAACTGATTGGACAAAAAATATTGAAATCTGTGAGTTAGTTGCTCATGATAAAAGGCAAGCTAGAGATGCTGTTAAAGTTATCAAAAAGAGACTAGGAAGCAAACACCCCAATACTCAACTTTATGCTGTCATGTTGCTGGAAATGTTGATGAACAATATTGGAGAGCATATTCATGAGCAGTCTGATTTGCCTGTGAGGGAGCGGATATTTCTCCTACTAGATGCTACACAAACATCCCTTGGTGGTGCATCTGGAAAGTTTCCACACTATTATAATGCATATTATGATTTGGTGAGTGCAGGAGTGCAGTTTCCTCAAAGGGACCAATTGGTCCAATCAAATCATCCTAGTTCACAACCTAGTAGGACTAATGATGTACCAAACAGGGAGCAGGCCTCACCTCGACATGAAGCAGTTGCTCCGCAAGCAGAACCCCAGACTGTCCCCGAATCAAGCATTATTCAAAAGGCTAGCAATGCATTAGAAGTACTGAAAGAGGTCCTTGATGCTGTTGATGCTCAAAATCCTCAAGGAGCAAGGGATGAATTCACCCTTGACCTTGTAGAACAATGTTCCTTTCAAAAGCAAAGGGTAGTGCATCTTGTGATGACTTCTCGAGATGAGAGGATAGTTTCTCGAGCAATTGAATTGAATGAGCAACTTCAGAAAGTTCTTGCAAGACATGATGACCTTCTTGCTGGCAGAGCTACAACGGCTGCTATTCGATTTGATCACGAAGAAGCAGAGGAGGAAGAGGAACCTGAACAGTTAATTCAAAGATTACGCAAGGGAAAGGCTTGTGCAAGGCCAGAAGATGAGGAGACTGAAACTGACATTGCTCGCATGGGTTTACTTGGAGAGAGACTCAATCGACCATTGATACGACCACTTTCGTTAGAGCCACCACCTCGTGATGCCGATACTCGCTCTCCACCTGTAGTGATCGCACCTCTGCGTCCAAAACATAATGGGGAGGCTCCTCATCATGTGGCAATTCCACCACCACCTGCAAAGCATGTTGAGAGAGAGAGATTTTTTCAGGAAAACAAGGATGGTTCTAATTTGTCTGGCCACATGAGAGGACTCTCCTTACATAGTCGTAATGGAAGCAGCTCTCATAGTGGAAGCTTTGATTTTAGTGATTGA 1194 0.4397 MAAELVNAATSEKLAETDWTKNIEICELVAHDKRQARDAVKVIKKRLGSKHPNTQLYAVMLLEMLMNNIGEHIHEQSDLPVRERIFLLLDATQTSLGGASGKFPHYYNAYYDLVSAGVQFPQRDQLVQSNHPSSQPSRTNDVPNREQASPRHEAVAPQAEPQTVPESSIIQKASNALEVLKEVLDAVDAQNPQGARDEFTLDLVEQCSFQKQRVVHLVMTSRDERIVSRAIELNEQLQKVLARHDDLLAGRATTAAIRFDHEEAEEEEEPEQLIQRLRKGKACARPEDEETETDIARMGLLGERLNRPLIRPLSLEPPPRDADTRSPPVVIAPLRPKHNGEAPHHVAIPPPPAKHVERERFFQENKDGSNLSGHMRGLSLHSRNGSSSHSGSFDFSD* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0381 397 MobiDBLite consensus disorder prediction 366 397 - -
Apr1g0381 397 SUPERFAMILY GAT-like domain 125 250 - -
Apr1g0381 397 ProSiteProfiles VHS domain profile. 9 121 IPR002014 GO:0035091|GO:0043130
Apr1g0381 397 Pfam VHS domain 5 76 IPR002014 GO:0035091|GO:0043130
Apr1g0381 397 Coils Coil 170 190 - -
Apr1g0381 397 CDD GAT_GGA_like_plant 169 247 - -
Apr1g0381 397 Gene3D - 161 257 IPR038425 -
Apr1g0381 397 MobiDBLite consensus disorder prediction 126 144 - -
Apr1g0381 397 MobiDBLite consensus disorder prediction 126 166 - -
Apr1g0381 397 Gene3D - 2 128 IPR008942 -
Apr1g0381 397 SUPERFAMILY ENTH/VHS domain 4 123 IPR008942 -
Apr1g0381 397 MobiDBLite consensus disorder prediction 362 397 - -
Apr1g0381 397 ProSiteProfiles GAT domain profile. 161 249 IPR004152 GO:0035091|GO:0043130
Apr1g0381 397 Pfam GAT domain 175 250 IPR004152 GO:0035091|GO:0043130
Apr1g0381 397 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 1 397 - -
Apr1g0381 397 PANTHER TOM1-LIKE PROTEIN 1 397 IPR044836 GO:0035091|GO:0043130|GO:0043328
Apr1g0381 397 CDD VHS 2 113 - -
Apr1g0381 397 SMART VHS_2 2 117 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0381 Apr-Chr1 4751622 4757277 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0381 - - gmx:100785131 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0381 1 4751622 4757277 Apr1g0381 1 4751622 4757277 ECH
Apr2g1089 2 17237721 17244138 Apr1g0381 1 4751622 4757277 PCT