Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1053 ATGCCTGCAAACGAAGCCACAAATCATCATGCTTTTGACTTTGATGGGTCCATAGATGATGCCCCTTCCCACCCGCAGCGTGCCTCAAAGTGCTATGATGATGATGGCCGTCTCAAACGAACTGGAACAATTTGGACTGCAAGCTCTCACATAATAACAGCTGTGATAGGATCAGGGGTGCTGTCTTTGGCATGGGCCATAGCTCAGCTAGGTTGGATTGCAGGTCCTGCTGTTATGATCTTATTCTCTTTGGTTACTTTCTATACTTCATCATTGCTTGCTGAATGTTATCGTGCCGGCGACCCCAATTCTGGCAAGAGAAACTACACTTACATGCAAGCAGTTCGCTCCATTCTTGGTGGAGTCAACGTTACGTTGTGCGGCATATTTCAGTACCTGAATCTATTGGGAATTGTAATAGGATACACAATTGCGGCATCTATTAGCATGATGGCAATCAAAAGGTCTAATTGTTTCCATAAATCTGGAGGCAAAAACCCATGTCACATGTCAAGCAACCAATACATGATCATTTTTGGCATAACCGAATTTTTCCTTTCTCAAATTCCCGATTTTGATCAAATATGGTGGCTTTCAATAGTTGCTGCAATAATGTCTTTCACCTATTCCATAATTGGTCTCGCTCTTGGAATTGCCAAAGTTGCAGAAAATGGTACTTTCAAGGGTAGCCTCACAGGAATCAGCATTGGACCTGTGTCACAGACCCAAAAAATATGGAGAAGTTCCCAAGCTCTTGGTGACATAGCCTTCGCCTATTCATATGCAGCGGTTCTCATTGAAATTCAGGACACCATAAAATCTCCACCATCTGAAGCAAAAACAATGAAGAAAGCCACACTGATAAGCATAGTAGTGACCACAACATTTTATATGCTTTGTGGCTGCATGGGCTATGCTGCTTTTGGGGATGCAGCACCTGGGAATTTGCTCACTGGGTTTGGTTTCTATAACCCTTATTGGCTTATAGACATTGCAAATGTTGCTATAGTGATTCACCTTGTGGGAGCATACCAAGTGTTTTCCCAACCCATCTTTGCCTTTGTGGAGCAAGGGGTGAAACAAAGATGGTCAAACATTGACAAGGAGTTCAAGATTCCAATTCCAGGTTTCACCCCATACAAACTAAACTTATTTAGATTAGTTTGGAGGACAATGTTTGTTATCCTAACAACTGTCATATCAATGTTGCTTCCATTCTTCAATGACATTGTGGGAGTGATTGGAGCATTGGGATTTTGGCCCTTAACTGTTTACTTTCCCTTGGAGATGTATATTTCACAGAAGAAGATCTCAAAATGGAGCAACAAATGGATTTGCCTCCAAATATTTAGTATGGCTTGCCTTTTAGTATCCGTTGTTGCTGCTGTGGGTTCAGTGGCAGGTGTCATGCTTGACCTAAAGAAGTATAAACCATTCCAATCAAACTATTAA 1452 0.4187 MPANEATNHHAFDFDGSIDDAPSHPQRASKCYDDDGRLKRTGTIWTASSHIITAVIGSGVLSLAWAIAQLGWIAGPAVMILFSLVTFYTSSLLAECYRAGDPNSGKRNYTYMQAVRSILGGVNVTLCGIFQYLNLLGIVIGYTIAASISMMAIKRSNCFHKSGGKNPCHMSSNQYMIIFGITEFFLSQIPDFDQIWWLSIVAAIMSFTYSIIGLALGIAKVAENGTFKGSLTGISIGPVSQTQKIWRSSQALGDIAFAYSYAAVLIEIQDTIKSPPSEAKTMKKATLISIVVTTTFYMLCGCMGYAAFGDAAPGNLLTGFGFYNPYWLIDIANVAIVIHLVGAYQVFSQPIFAFVEQGVKQRWSNIDKEFKIPIPGFTPYKLNLFRLVWRTMFVILTTVISMLLPFFNDIVGVIGALGFWPLTVYFPLEMYISQKKISKWSNKWICLQIFSMACLLVSVVAAVGSVAGVMLDLKKYKPFQSNY* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1053 483 PANTHER OS05G0424000 PROTEIN-RELATED 25 477 - -
Apr2g1053 483 MobiDBLite consensus disorder prediction 1 31 - -
Apr2g1053 483 Pfam Transmembrane amino acid transporter protein 40 470 IPR013057 -
Apr2g1053 483 PANTHER OS02G0102200 PROTEIN 25 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1053 Apr-Chr2 16896989 16900662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1053 20 483 Organic Solute Cotransporters AT5G09220 76.695 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1053 K24917 - gmx:100782803 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1053 2 16896989 16900662 Apr2g1053 2 16896989 16900662 ECH
Apr2g1053 2 16896989 16900662 Apr1g0411 1 5109877 5117465 ECH