Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1011 ATGGGTACTTCTCCACATGCCGTTGAAGGTAGACACCGTTTTCCAGCACCAATTGAAGAGTTATACAGACGAAGATTACCAAGAAGTAATGCAAAAGATATAGAGAAGCCTATCCACTTACCCATCCATGATAAAAGCTCAAGATGCAAGTTTTCTTTCTTAAAACCTTTTGTCCTTGTGTTAATCATTTGCGGCACTTTTTCAACTCTCATGTACTCTCCAGAGGTTTACAAAAGCCACCATTTATTAAGCTCTAGCTCTGGGTGGATATGGGGTGGTTCAGATCCTCGGTATATATCGAATGTAAATATTAACTGGGATGGTATATTGCAAATTACTGAGAATTTGACTAGAAAAAAAGAATTTAAAGGGGTTGGCCTTCTAAACTTCAATAAGACTGAAATAAACCATTGGAAACAGCTTATTCCTGATGTGACACATTTGGTTATGCACTTGGAGTATGCGGCAAAAAATGTGACATGAGAATCACTGTACCCAGAATGGATTGATGAGGAAGAAGAAACTGAAGTTCCCATTTGTCCTGCTCTCCCAAGTCTTAAATCTCCTGGAACAAGGCTTAATCTCATAGCTGTGAAGCATCCTCATCCTAATAGGGGGAATAATTGGTCTAGAGATGTAGCTAGGTTGCACTTGCAACTAGCAGCAACTGAACTTGCAACCTCTTTCAAAGGAAATTACCCTGTGTATGTGCTTTTTGTTACCCATTTCTTTCCCACACCAAATTTGTTTCACTGCGAAGAACTTGTGGGACATGAAGGAAATGTATGGCTATACAAACCAAATTTGATTGTTTTGAGAAAAAAACTACACCTCCCAGTAGGATCGTGTGAACTTGCACTTCCTTTGAGGGGAAAAGAGCTGATTTACGCGGCAGATGTTCATAGAGAAGCATATGCTACAATTCTTCATTCAGCTCATGTTTATGTTTGTGGAGCTATTGCTGCTGCACAAAGCATTCGCATGTCTGGATCAACCCGGGACCTAATTATACTTGTTGATGAAACAATCAGTGAATACCACAGAAGTGGTTTGGAAGCAGCAGGGTGGAAAATTAGGACAATACAAAGGATTCGAAACCCAAAAGCTGAAAAAGATGCTTACAATGAATGGAACTACAGCAAGTTTCGTTTATGGCAACTAACAGATTATGACAAGATAATATTCATTGATGCAGATTTACTCATACTAAGAAACATAGATTTCCTATTTGGAATGCCAGAAATCACTGCTACAGGAAACGATGCCACACTTTTTAACTCAGGTGTGATGGTGGTTGGGCCATCAAATTGCACTTTCAAGCTCCTAATGGATAATATTAATGAGTTTTCCTACAATGGAGGGGACCAAGGATACTTAAATGAAATATTTACATGGTGGCATAGGATACCAAGACACATGAACTTTCTGAAGCATTTTTGGGCTGGTGATGAGGAAGAGAAGAAACAAACGAAGACCATGTTATTTGGTGCTGAGCCCTATGTCCTTCACTATCTAGGAATGAAGCCATGGTTGTGCTTCCGTGACTATGATTGTAACTGGAATTCTAATATATTTCGTGAGTTTGCAAGTGATGTTGCTCATGAAAGGTGGTGGAAGGTGCATAATGCAATGCCCGAGATGTTGCAGCAGTTTTGCATGTTGAAGTCCAAGCAAAAGGCACAGTTAGAATGGGATCGTAGGCAAGCTGAATTAGCAAACTACACAAATGGGCATTGGAGAATCAAAGTTAAAGATCAGCGATTGAATAAATGCATAGAAAATTTGTGTTCATGGGAAAGCATGTTGAAGCACTGGGGAGAGACTAATTGGGCAGATGATGAGTCTTATACTCCTACACCACCCATCATTGCCACATCATCTCTCTCTGCTTTGTGA 1896 0.3987 MGTSPHAVEGRHRFPAPIEELYRRRLPRSNAKDIEKPIHLPIHDKSSRCKFSFLKPFVLVLIICGTFSTLMYSPEVYKSHHLLSSSSGWIWGGSDPRYISNVNINWDGILQITENLTRKKEFKGVGLLNFNKTEINHWKQLIPDVTHLVMHLEYAAKNVT*ESLYPEWIDEEEETEVPICPALPSLKSPGTRLNLIAVKHPHPNRGNNWSRDVARLHLQLAATELATSFKGNYPVYVLFVTHFFPTPNLFHCEELVGHEGNVWLYKPNLIVLRKKLHLPVGSCELALPLRGKELIYAADVHREAYATILHSAHVYVCGAIAAAQSIRMSGSTRDLIILVDETISEYHRSGLEAAGWKIRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMPEITATGNDATLFNSGVMVVGPSNCTFKLLMDNINEFSYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWAGDEEEKKQTKTMLFGAEPYVLHYLGMKPWLCFRDYDCNWNSNIFREFASDVAHERWWKVHNAMPEMLQQFCMLKSKQKAQLEWDRRQAELANYTNGHWRIKVKDQRLNKCIENLCSWESMLKHWGETNWADDESYTPTPPIIATSSLSAL* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1011 630 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 1 18 607 - -
Apr2g1011 630 PANTHER GLYCOGENIN SUBFAMILY MEMBER 18 607 - -
Apr2g1011 630 Pfam Glycosyl transferase family 8 308 510 IPR002495 GO:0016757
Apr2g1011 630 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 299 546 IPR029044 -
Apr2g1011 630 CDD GT8_Glycogenin 302 543 - -
Apr2g1011 630 SUPERFAMILY Nucleotide-diphospho-sugar transferases 302 543 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1011 Apr-Chr2 16410387 16417769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1011 9 630 Glycosyltransferase AT3G18660 62.112 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1011 K20890 - gmx:100783884 1107.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1011 2 16410387 16417769 Apr1g0468 1 5772168 5778624 PCT