Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0237 ATGGCACCCTCTATTGTTTTCTTTGTGTTGTTCACTCTGTTGATTCAAACAAGCGGTTATGTTAAACCCCTTGAAGAAGGTTTCATCTACGGGGTCATATCTGACAAGGGTCTCGATTATGCCAAGGACTTGCTGATAGAGCAAGGTATTGCTTCCATTCTTCAGCTTCAGCTTCCTGAGATTGAGAATTCTGCCCAAGTCCCTCTTGTTGGAAAAGCTAAAGTGGTTCTTTCTGACATCACAATCAAGGATATTCAAGTCAATTCTTCGTCTGTTAAGACTGGAGAGAATGGTATTTTTCTAGTTGTTTCAGGTGCCACTGCCAATTTGAGTATGCGGTGGAGGTATTCTTGCAGCACTTGGTTAATCCCAATTGGAATTTCTGATAGTGGAACTGCTTCAGTGAAGGTTAAAGGTATGCAAGTGGGGCTTACAGTAAATTTAAGGAACCAAGAAGGAACTCTTAAGTTGACTCTCTTAGATTACGGATGTTATGTTGGAGATTTATCCATAAAGTTGGACGGTGGGGCATCTTGGCTTTACCAACTGCTAGTAGATGTTTTTGAAGGGAATATGGCATCTGCAATTGAAGAGGCCATTTCAGAGAAAATAAGGGAAGGGATAGAAAATCTTGACAATTTATTACAATCTCTTCCAAAGCAAATCTCACTTGACCAAACTGCTGCACTAAATGTTTCTTTTGTTGGCAATCCTGTGTTGAGTAATTCCTCTATTGCAATTGCAATTAATGGTTTATTCACAGGGAGAAATGAAGCTTTAGTACCTCAACGTTACCAGAAAGGATTAAAGATTTCTTCTGCCTGTGGTGGTTTACCAAAGATGATAAAGGTTTCAATACATGAAAATGTGTTCAAATCTGCTTCCCTAGTTTACTTCAACGCTGGTAAAATGCAATTGATTGTTGATGAACTACCCGATCAAGCCATTTTGAACACAGCTGAATGGAGATTCATAGTTCCTCAATTATACAAGCGATATCCTAATGATGACATGCAGCTTAATATCTCTGTATCTTCTCCACCAGTTATACAAGTAACCTACCAGGATATTGGGGCAACTATTTTTGTAGATATAACAATTGATGTTCTGGAAGATGGTGAAGTCATACCTGTTGTGTGCATCTCAGTGGAAATTAGTGCTTCATGTGCTGCTCAAATCAAAGGAAACAATATTGCTGGTAGACTTATATTACAAAAATTTTCGACATACTTGAAATGGAGCAAAATTGGGAAACTGCACATGCATTTGATTCAGTCACTAACGTCAAGTGTCCTCAAAACTGTGATCTTTCCATACCTGAACTTCCAATTAAAGAGAGGACTTCCATTGCCAATTATTGATGGTTTTGGCTTTCAGAATGCTAATATACTGTACAACTATCCATGGATTGCAGTATGTAGTGATGTTTTCTTCTTAGGAGACTACTATCTTAGTGAGCAATGTGCTAATGTTTCATAA 1479 0.3827 MAPSIVFFVLFTLLIQTSGYVKPLEEGFIYGVISDKGLDYAKDLLIEQGIASILQLQLPEIENSAQVPLVGKAKVVLSDITIKDIQVNSSSVKTGENGIFLVVSGATANLSMRWRYSCSTWLIPIGISDSGTASVKVKGMQVGLTVNLRNQEGTLKLTLLDYGCYVGDLSIKLDGGASWLYQLLVDVFEGNMASAIEEAISEKIREGIENLDNLLQSLPKQISLDQTAALNVSFVGNPVLSNSSIAIAINGLFTGRNEALVPQRYQKGLKISSACGGLPKMIKVSIHENVFKSASLVYFNAGKMQLIVDELPDQAILNTAEWRFIVPQLYKRYPNDDMQLNISVSSPPVIQVTYQDIGATIFVDITIDVLEDGEVIPVVCISVEISASCAAQIKGNNIAGRLILQKFSTYLKWSKIGKLHMHLIQSLTSSVLKTVIFPYLNFQLKRGLPLPIIDGFGFQNANILYNYPWIAVCSDVFFLGDYYLSEQCANVS* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0237 492 PANTHER OS06G0309200 PROTEIN 1 492 IPR045897 -
Apr2g0237 492 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 33 242 IPR017943 GO:0008289
Apr2g0237 492 Gene3D - 36 216 - -
Apr2g0237 492 Pfam LBP / BPI / CETP family, C-terminal domain 280 463 IPR001124 GO:0008289
Apr2g0237 492 SMART bpi1_3 33 258 IPR017942 GO:0008289
Apr2g0237 492 PIRSF Lipid_binding_protein 4 482 IPR030675 GO:0005615|GO:0008289
Apr2g0237 492 Gene3D - 33 463 - -
Apr2g0237 492 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 244 477 IPR017943 GO:0008289
Apr2g0237 492 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 1 492 - -
Apr2g0237 492 CDD BPI1 33 254 - -
Apr2g0237 492 Pfam LBP / BPI / CETP family, N-terminal domain 37 211 IPR017942 GO:0008289
Apr2g0237 492 SMART bpi2_2 276 481 IPR001124 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0237 Apr-Chr2 2983517 2988849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0237 K05399 - gmx:100815362 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0237 2 2983517 2988849 Apr2g0237 2 2983517 2988849 ECH
Apr2g0237 2 2983517 2988849 Apr9g1787 9 26849411 26853053 PCT