Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2132 ATGGTGGCGGAGGAGAAATCCCAAAAAACATACCCGACAACTACTGAGGTAGTGGATGAACTAAAGAGAATGGTGGACTTAGGATTCCCAATTGCAGCCATGAGTCTTGTGGGATACATAAAAAACATGGTCTTAGTTGTGTGCATGGGAAGGTTGGGAAGCCTTGAGTTAGCTGGTGGTGCTTTGGCCATAGGCTTCACCAACATAACCGGTTACTCTGTCCTCTCAGGTTTAGCCATGGGCATGGAACCTCTATGCACACAAGCCTTTGGTTCAAGAAACTTCTCTCTAGTCTCTCTCACTTTACAAAGGACAATTTTGATGTTATTGGTAGCGTCACTGCCCATTTGTCTCTTGTGGCTAAAGCTTGAACCTTTGATGTTATGGCTTCATCAAAACCCCGATATAAGTAAAGTGGCAAGCCTCTATTGCCGCTTCTCCATCCCTGACCTCTTAGCAAATAGTTTCCTTCACCCAATTCGCATCTATTTACGTAGCAAAGGGACAACTTGGCCACTTTTGTGGTGCACTTTACTTTCCATTCTTGTACACATCCCTATCGTCACTTTTTTGACCTTCAAACTTCACCTTGGTGTACCCGGGATTGCTATGTCATCTTTTGTTGCCAATTTCAACACCCTTTTCTTCCTCCTATCATATATGTTCTACATGCGCATCTCAAAGGAGTCACTATCTATGCCACTATTGATATCTTGTCCCTTGTCATCACAACCAGATCAAAATCCAACTAGTGTTAGTGCCACAACTACACTAGGCAAGGAATGGGGCATGTTAATAAGGTTTTCTATTCAAAGTTGTTTAAGTGTGTGCTTGGAGTGGTGGTGGTACGAGTTCATGACAATTCTAGCTGGTTACCTCCACAACCCGCATGTTGCTTTAGCCACTGCTGGCATAGTGATACAAACAACTTCTCTTATGTACACTTTACCAACGGCACTAAGTGCATCAGTGTCAACAAGAGTAGGAAATGAACTCGGTGCGGGTCAACCCGAAAGAGCAAGCTTGTCAACAGTGGTAGCAATAGGAATGGCACTTGCAAGTTCAATATTGGGGTTGTTAGGGACCACATTAGGAAGAGAGAGATGGGGGAGAGTGTTCACTAGTGATAGTGAGGTGTTAGAACTAACCATGAGTGTGTTACCCATAATTGGAGTTTGTGAGCTAGCAAATTGTCCGCAAACCACAAGTTGTGGAATCCTTAGGGGAAGTGCTAGGCCTGGTGTTGGGGCTGGGATAAATTTTTATTCATTTTACTTGGTGGGAGCTCCAGTGGCCATAGTGTTGGCATTTGTTTGGAGACTAGGGTTGGTGGGTCTTTGTTATGGGCTGTTGGCAGCACAGATAGCATGTGTGATCTCAATTCTAGTTGTGGTATACAACACAGATTGGGAAAGAGAGTCATTGAAGGCAAAAAGCTTGGTGGGAAAGAGTTCATATGACAATTTGGCACATGGAGACCAAACAGTCAAATGTGAAGAAGGTATTCTCTTTCTCTATGAGAATAGCTCCCAAAAGTGA 1539 0.4379 MVAEEKSQKTYPTTTEVVDELKRMVDLGFPIAAMSLVGYIKNMVLVVCMGRLGSLELAGGALAIGFTNITGYSVLSGLAMGMEPLCTQAFGSRNFSLVSLTLQRTILMLLVASLPICLLWLKLEPLMLWLHQNPDISKVASLYCRFSIPDLLANSFLHPIRIYLRSKGTTWPLLWCTLLSILVHIPIVTFLTFKLHLGVPGIAMSSFVANFNTLFFLLSYMFYMRISKESLSMPLLISCPLSSQPDQNPTSVSATTTLGKEWGMLIRFSIQSCLSVCLEWWWYEFMTILAGYLHNPHVALATAGIVIQTTSLMYTLPTALSASVSTRVGNELGAGQPERASLSTVVAIGMALASSILGLLGTTLGRERWGRVFTSDSEVLELTMSVLPIIGVCELANCPQTTSCGILRGSARPGVGAGINFYSFYLVGAPVAIVLAFVWRLGLVGLCYGLLAAQIACVISILVVVYNTDWERESLKAKSLVGKSSYDNLAHGDQTVKCEEGILFLYENSSQK* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2132 512 TIGRFAM matE: MATE efflux family protein 30 446 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr1g2132 512 PANTHER MULTIDRUG RESISTANCE PROTEIN 12 486 - -
Apr1g2132 512 Pfam MatE 272 433 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr1g2132 512 Pfam MatE 30 187 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr1g2132 512 CDD MATE_eukaryotic 20 476 IPR045069 GO:0042910|GO:1990961
Apr1g2132 512 PANTHER PROTEIN DETOXIFICATION 55 12 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2132 Apr-Chr1 30846348 30848520 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2132 K03327 - gmx:100785533 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2254 9 30384224 30385904 Apr1g2132 1 30846348 30848520 PCT