Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0643 ATGGCGGAACTGGTAGGGCCTCGCTTGTACAGCTGCTGTAATTGTAGAAACCATGTCTCACTCCATGATGATATAATATCCAAGGCTTTTCATGGAAGAAACGGCCGAGCTTTTCTGTTTTCTCATGCTATGAATGTTATCACGGGGCCAAAAGAAGACAGGCATCTCTTGACTGGCCTCCACACTGTTGCTGATGTTTATTGTGGTGATTGTCGTGAAGTGCTGGGTTGGAAGTATGAAAAAGCTTATGAAGCATCGCAGAAGTACAAGGAAGGAAAGTTCATACTTGAAAAGTCAAAAATTGTTAAGGAGAACTGGTAG 321 0.4299 MAELVGPRLYSCCNCRNHVSLHDDIISKAFHGRNGRAFLFSHAMNVITGPKEDRHLLTGLHTVADVYCGDCREVLGWKYEKAYEASQKYKEGKFILEKSKIVKENW* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0643 106 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 106 IPR039058 -
Apr1g0643 106 PANTHER PROTEIN YIPPEE-LIKE 1 106 - -
Apr1g0643 106 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 10 102 IPR004910 -
Apr1g0643 106 ProSiteProfiles Yippee domain profile. 8 105 IPR034751 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0643 Apr-Chr1 7716504 7719080 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0643 - - gmx:100800980 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1199 10 24309211 24310171 Apr1g0643 1 7716504 7719080 ECH
Apr1g0643 1 7716504 7719080 Apr1g0643 1 7716504 7719080 ECH