Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1199 ATGGAGGAGTTGATGGGATCACGGGCATATTGCTGCTTTAAGTGCCAGAACCTTGTTGCTTTCCATGATGATATTGTTTCCAAAGATTTCCAGGCAAGCAATGGAAGAGCTTTTTTATTTTCTCATGCAATGAACATTCTTTTGGGTCCTAAAGAGGATAGGCAACTTATCACTGGTCTTCACACAGTGGCTGATGTATATTGTTCTGATTGTGGAGAGGAACTTGGTTGGAAATATATTAAAGCTTATGAGGAAACACAGAAGTACAAAGAAGGAAAATGCGTCTTAGAGAAGTTCAAGATAGTCAAAGGCAACTGA 318 0.3931 MEELMGSRAYCCFKCQNLVAFHDDIVSKDFQASNGRAFLFSHAMNILLGPKEDRQLITGLHTVADVYCSDCGEELGWKYIKAYEETQKYKEGKCVLEKFKIVKGN* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1199 105 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 10 101 IPR004910 -
Apr10g1199 105 ProSiteProfiles Yippee domain profile. 8 105 IPR034751 -
Apr10g1199 105 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 4 104 IPR039058 -
Apr10g1199 105 PANTHER PROTEIN YIPPEE-LIKE 4 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1199 Apr-Chr10 24309211 24310171 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1199 - - gmx:100788878 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1199 10 24309211 24310171 Apr1g0643 1 7716504 7719080 ECH
Apr10g1199 10 24309211 24310171 Apr10g1199 10 24309211 24310171 ECH