Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0332 ATGGCAGACGTTCCGCCGCCGGAGGGCCAGATGAACGGCGGAGGAACGGCGGCGCCAAACTCCTCCGAAACCCTCGGATCGAAGCGCCAGCGAAGACCTAGTGTCCGATTGGGCGACATCGGAGACCAGCCCTACGACTCCCACCCTCGCCGGACCACCGCGAAGCCGTGGCGGCTCGCCTTCGACCACAACCGCAAGGACGCCGCAGGTAAACCCTCGAAGACTCGTCCTTTAACGAACTTAACCTCCGCCGCCGAGTTCGGCGAAACCCTAGAGAGCGACGGGAACATGGACAGCGTCGTGATTGGTAGTTGGAAAGTGAAGGATTCGAAGAAAAGGGGTTCGAAGAGGGTTAGATCGAATTGGATTTCGAGAATCGACGGCGAAGATGTCGACGACGGGTACCATCGTGATTTCGACGTCGAAGCCTCGGAAAGCCCTCTGAAGGAGCAGAGCCCTTTTCATTCGATGGAGAATTTGGGAGTTGATGGACACGGGCATGGGAATGATAGAGATGTGCAGCATTATCATGATAGGAATGGGAATGGTGGAAGAGGAGAAGATGGGGTTAGGATTTGGCTTAATGGATTAGGGTTAGGTCGTTATGCTCCTGTTTTTGAAATTCACGAGGTTGATGATGAGGTTTTGCCTTTGTTAACTCTAGAGGATCTTAAAGATATGGGGATCAATGCTGTTGGGTCTAGAAGGAAAATGTATTGTGCAATTCAGAAGCTTGGGAAAGGGTTCTCCTGA 753 0.5286 MADVPPPEGQMNGGGTAAPNSSETLGSKRQRRPSVRLGDIGDQPYDSHPRRTTAKPWRLAFDHNRKDAAGKPSKTRPLTNLTSAAEFGETLESDGNMDSVVIGSWKVKDSKKRGSKRVRSNWISRIDGEDVDDGYHRDFDVEASESPLKEQSPFHSMENLGVDGHGHGNDRDVQHYHDRNGNGGRGEDGVRIWLNGLGLGRYAPVFEIHEVDDEVLPLLTLEDLKDMGINAVGSRRKMYCAIQKLGKGFS* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0332 250 MobiDBLite consensus disorder prediction 43 72 - -
Apr1g0332 250 Gene3D - 185 245 IPR013761 -
Apr1g0332 250 PANTHER PROTEIN BICAUDAL C HOMOLOG 1-A-LIKE 20 250 - -
Apr1g0332 250 SMART SAM_4 182 248 IPR001660 GO:0005515
Apr1g0332 250 PANTHER SCP160 20 250 - -
Apr1g0332 250 ProSiteProfiles SAM domain profile. 185 248 IPR001660 GO:0005515
Apr1g0332 250 MobiDBLite consensus disorder prediction 1 81 - -
Apr1g0332 250 MobiDBLite consensus disorder prediction 14 28 - -
Apr1g0332 250 SUPERFAMILY SAM/Pointed domain 187 245 IPR013761 -
Apr1g0332 250 CDD SAM_superfamily 190 244 - -
Apr1g0332 250 Pfam SAM domain (Sterile alpha motif) 189 245 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0332 Apr-Chr1 4005688 4007147 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0332 - - gmx:102660352 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0332 1 4005688 4007147 Apr2g1139 2 17653342 17656890 ECH
Apr1g0332 1 4005688 4007147 Apr1g0332 1 4005688 4007147 ECH