Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr1g0287 | ATGGCAACATTGGGAGAGAGTCCACGGAGCCCAGAGGCAAAGCTGGGGATGAGAGTGGAGGATCTGTGGGATGTTCAGGAACCACAACTAAGTCCTAATGAGAAGCTCAATGCATGCTTTGAAAGCATCCCTGTCTCTGCTTTTCCTCCTCCTCCTTCAAATCAAGAAATTGAGATAAAATCAGATGCAACCCTGGCTGAAGCTGTAAAAATACTTGCACAACACAACATTCTGAGTGCACCTGTGGTGGATGTTGACGCACCTGAAGATGCTAGTTGGATTGACAGATATATAGGAATTGTTGAGTTTGCTGGAATTGTTGTATGGATTCTGCATCAGTCTGAACCTACATCTCCTAGGAGTCCATCCAGTGGAACTGCTACTGCAGCTGCAGCTAATGGAATGGCTTCTGCTCCAGAAAATGAAGTTTTAGGCCTAGGATCTGCTGCCACAACTTCAGGCAACTTTTTTGAGGACCTCACTTCTTCTCAACTTTATAAGAATACCAAGGTTGGTGATATTTCAGGATCATTCCGCTGGGCACCATTTCTTGCTTTGGAGAGATCAAACTCATTTTTGACCATGCTTTTGCTGCTTTCAAAATACAAGATGAAGAGTATTCCTGTGGTGGACTTGGGTGCAGGTAGAATTGATAACATTATTACACAGTCTGCTGTAATTCACATGTTGGCAGAATGTGCTGGTCTACAGTGGTTTGAGAGTTGGGGAACCAAGAAACTGTCTGAAGTTGGCCTTCCCATGGTGAAACCAAATCAAATCATCAAGGTTTACGAGGATGAACCAGTGCTTCAAGCCTTTAAACTGATGAGGAAAAAGAGGATTGGAGGGGTGCCTGTGATTGAAAGGGGTGGCAGTCGAGCAATTGGTAATATAAGCCTTCAAGATGTTCAGTTCCTCCTAACTGCTCCTGAAATCTACCATGATTATAGAGCTATTACAGCAAAATACTTCCTGACTGCCGTTAGAAGCTACTTAGAGAAGCATGAAGGGGCCTTTCCAATGTCAAGTGACTTGATTACATGCAAAAAGGACTTCACAATCAAAGAATTGATTCAACTGCTTGATCATGAGAAGATTCACCGGGTCTATGTCATTGACGATGATGGTAATCTTGAAGGATTGATCACACTGAGAGATATCATCTCAAGGCTAGTACATGAGCCTCGTGGTTATTTTGGTGATTTCTTTGATGGGGTTTTCCCAATGCCTCCAAACAGCAGGGTTTGA | 1248 | 0.4335 | MATLGESPRSPEAKLGMRVEDLWDVQEPQLSPNEKLNACFESIPVSAFPPPPSNQEIEIKSDATLAEAVKILAQHNILSAPVVDVDAPEDASWIDRYIGIVEFAGIVVWILHQSEPTSPRSPSSGTATAAAANGMASAPENEVLGLGSAATTSGNFFEDLTSSQLYKNTKVGDISGSFRWAPFLALERSNSFLTMLLLLSKYKMKSIPVVDLGAGRIDNIITQSAVIHMLAECAGLQWFESWGTKKLSEVGLPMVKPNQIIKVYEDEPVLQAFKLMRKKRIGGVPVIERGGSRAIGNISLQDVQFLLTAPEIYHDYRAITAKYFLTAVRSYLEKHEGAFPMSSDLITCKKDFTIKELIQLLDHEKIHRVYVIDDDGNLEGLITLRDIISRLVHEPRGYFGDFFDGVFPMPPNSRV* | 416 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr1g0287 | 415 | PANTHER | SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1-RELATED | 1 | 415 | - | - | |
| Apr1g0287 | 415 | Gene3D | - | 244 | 394 | IPR046342 | - | |
| Apr1g0287 | 415 | ProSiteProfiles | CBS domain profile. | 341 | 399 | IPR000644 | - | |
| Apr1g0287 | 415 | ProSiteProfiles | CBS domain profile. | 52 | 117 | IPR000644 | - | |
| Apr1g0287 | 415 | SMART | cbs_1 | 55 | 111 | IPR000644 | - | |
| Apr1g0287 | 415 | SMART | cbs_1 | 344 | 392 | IPR000644 | - | |
| Apr1g0287 | 415 | SMART | cbs_1 | 259 | 308 | IPR000644 | - | |
| Apr1g0287 | 415 | SMART | cbs_1 | 182 | 231 | IPR000644 | - | |
| Apr1g0287 | 415 | SUPERFAMILY | CBS-domain pair | 246 | 401 | IPR046342 | - | |
| Apr1g0287 | 415 | ProSiteProfiles | CBS domain profile. | 254 | 316 | IPR000644 | - | |
| Apr1g0287 | 415 | CDD | CBS_pair_SF | 59 | 118 | - | - | |
| Apr1g0287 | 415 | Gene3D | - | 37 | 236 | IPR046342 | - | |
| Apr1g0287 | 415 | PANTHER | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT | 1 | 415 | - | - | |
| Apr1g0287 | 415 | SUPERFAMILY | CBS-domain pair | 29 | 231 | IPR046342 | - | |
| Apr1g0287 | 415 | Pfam | CBS domain | 339 | 392 | IPR000644 | - | |
| Apr1g0287 | 415 | Pfam | CBS domain | 259 | 303 | IPR000644 | - | |
| Apr1g0287 | 415 | CDD | CBS_pair_SF | 196 | 303 | - | - | |
| Apr1g0287 | 415 | CDD | CBS_pair_SF | 259 | 388 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Apr1g0287 | Apr-Chr1 | 3362817 | 3365852 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Apr1g0287 | - | - | gmx:100780629 | 702.205 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Apr1g0287 | 1 | 3362817 | 3365852 | Apr1g0287 | 1 | 3362817 | 3365852 | ECH | |
| Apr10g1495 | 10 | 27392733 | 27396021 | Apr1g0287 | 1 | 3362817 | 3365852 | PCT |