Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1495 ATGGCATTGGCAACAATGAGAGACAGTCCACGGAGCCCAGAAGCGAAGCTGGGGATGCGAGTGGAGGATCTATGGGACGTTCAGGAGGCACAGCTAAGTCCTACTGAGAAGCTCAACGCGTGCTTTGAAAGCATCCCTGTTGCTGCGTTTCCTTTGGCTCCGTCAAACCAAGAAATTGAGATAAAATCAGACGCCACCTTAGCTGAAGCTGTTAAGATACTGGCACATCACAACATTTTCAGCGCACCTGTGGTGGATGTTGACGCGCCTGAAGATGCTAGTTGGATTGACAGATACATTGGAATTGTTGAGTTTGCTGGAATTGTTGTTTGGATTTTGCATCAGTCTGAACCTACATCTCCTAAGAGTCCATCTACGCCATCCAGTGCAAGTGCTATTGCTGCTGCAGCTAATGGAGTGAGTTTTGCTTTAGAACTTGAAGCCTTAGGCCTTGGATCTGCAACAACAACTTCGGGAAACTTTTTTGAGGATCTGACTTCTTCTGAACTTTATAAGAATACCAAGGTTCGTGATATTTCAGGGACATTCCGCTGGGCCCCATTTCTTGCTTTAGAGAGATCAAACTCATTTCTAACTATGCTCTTACTTCTTTCTAAGTACAAGATGAAGAGTGTTCCTGTGTTGGATTTAGGAGCTGGCAGAATTGACAACATTATTACACAATCTGCGGTAATTCATATGTTGGCAGAATGTGCTGGGCTTCAGTGGTTTGAAAGTTGGGGAACCAAGAAACTATCTGAAGTTGGTCTTCCCCTGGTGGCACCAAATCATATCATCAAGATTTATGAGGATGAACCAGTCCTTCAAGCATTTAAAATAATGAGGAAAAAGAGGGTTGGAGGAGTGCCTGTGATAGAAAGAGATAGCAAAAGGGCATTTGGTAATATAAGCTTGCGAGATGTTCAATTCTTGCTAACTGCACCAGAAATCTATCATGACTATAGGGCTATTACTGTAAAGGACTTTCTGACCGCTGTTAGAAGCTACTTAGAGAAGAATAAAAAAGCACTTCCAATGTTAAGTGAATTTGTTACATGCAAAAAGGACTGTACAATAAAAGAATTGATTCAACTGCTTGATCATGAGAAGATTCATAGGGTCTATGTGGTGGACAACGATGGTGATTTGCAAGGGCTAATCACACTGAGAGATATCATCTCAAGGCTAGTACATGAACCCCGTGGCTACTTTGGTGATTTCTTTGATGGTGTTCTCCCTCTGCCTCCAAACACCAGGGTTTAA 1263 0.4283 MALATMRDSPRSPEAKLGMRVEDLWDVQEAQLSPTEKLNACFESIPVAAFPLAPSNQEIEIKSDATLAEAVKILAHHNIFSAPVVDVDAPEDASWIDRYIGIVEFAGIVVWILHQSEPTSPKSPSTPSSASAIAAAANGVSFALELEALGLGSATTTSGNFFEDLTSSELYKNTKVRDISGTFRWAPFLALERSNSFLTMLLLLSKYKMKSVPVLDLGAGRIDNIITQSAVIHMLAECAGLQWFESWGTKKLSEVGLPLVAPNHIIKIYEDEPVLQAFKIMRKKRVGGVPVIERDSKRAFGNISLRDVQFLLTAPEIYHDYRAITVKDFLTAVRSYLEKNKKALPMLSEFVTCKKDCTIKELIQLLDHEKIHRVYVVDNDGDLQGLITLRDIISRLVHEPRGYFGDFFDGVLPLPPNTRV* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1495 420 Gene3D - 29 240 IPR046342 -
Apr10g1495 420 ProSiteProfiles CBS domain profile. 260 321 IPR000644 -
Apr10g1495 420 CDD CBS_pair_SF 201 308 - -
Apr10g1495 420 PANTHER BNAA06G16460D PROTEIN 8 420 - -
Apr10g1495 420 CDD CBS_pair_SF 264 393 - -
Apr10g1495 420 ProSiteProfiles CBS domain profile. 346 404 IPR000644 -
Apr10g1495 420 Pfam CBS domain 265 308 IPR000644 -
Apr10g1495 420 Pfam CBS domain 346 397 IPR000644 -
Apr10g1495 420 SUPERFAMILY CBS-domain pair 30 236 IPR046342 -
Apr10g1495 420 SMART cbs_1 57 113 IPR000644 -
Apr10g1495 420 SMART cbs_1 349 397 IPR000644 -
Apr10g1495 420 SMART cbs_1 187 236 IPR000644 -
Apr10g1495 420 SMART cbs_1 264 313 IPR000644 -
Apr10g1495 420 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 8 420 - -
Apr10g1495 420 SUPERFAMILY CBS-domain pair 250 406 IPR046342 -
Apr10g1495 420 ProSiteProfiles CBS domain profile. 54 119 IPR000644 -
Apr10g1495 420 Gene3D - 249 399 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1495 Apr-Chr10 27392733 27396021 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1495 - - gmx:100818156 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1495 10 27392733 27396021 Apr1g0287 1 3362817 3365852 PCT